Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g02677 ATGGCCCAAGCAATGTGGTTATCAACTACTTCACCTCTGCTTTCCCAAAAAGCAGGGTACTCTGCAAAAACACCAAGCAATGCTATTGCACCCTTCAAGGCCTCCTTTCCATCAAGGAGGCAGTTGCCAAGGGTGAGAGCTCAAGCTACTGGTGATAACAAAGACAATTCTGTGGAAGTTCATGTTAACAAAGGTGACCAAGGGACCGCTGTGGAGAGGAAGCCTCGCAGAGTTGCCATGGACATTTCACCATTTGGTCTATTGGACCCATGGTCACCCATGAGGAGCATGCGGCAGATGCTGGACACAATGGACAGAATTTTCGAAGATGCCATGACATTCCCTGGAAGAAACATGGGAGGAAGGGAGATCCGTACCCCTTGGGACATCAAAGATGAAGAACATGAAATCAAAATGCGTTTTGACATGCCTGGTCTTTCCAAGGAAAATGTCAAGGTATCAGTGGAGGATGATGTGCTTGTTATAAAAGGTGATCATAAGACAGAACAAGGTGGAGATGATTCTTGGTCAACCAAGAGCCATAGCTCTTATGATACCCGTTTGCAGCTTCCAGATAACTGTGAGAAGGACAAAGTTAAAGCAGAGTTGAAAAATGGTGTGCTTTATATCACCATTCCTAAGACCAAAGTTGAACGCAAGGTTATTGATGTGGAAATTCAGTGA 684 0.4503 MAQAMWLSTTSPLLSQKAGYSAKTPSNAIAPFKASFPSRRQLPRVRAQATGDNKDNSVEVHVNKGDQGTAVERKPRRVAMDISPFGLLDPWSPMRSMRQMLDTMDRIFEDAMTFPGRNMGGREIRTPWDIKDEEHEIKMRFDMPGLSKENVKVSVEDDVLVIKGDHKTEQGGDDSWSTKSHSSYDTRLQLPDNCEKDKVKAELKNGVLYITIPKTKVERKVIDVEIQ. 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g02677 227 CDD ACD_sHsps-like 129 214 - -
Seca4g02677 227 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 119 227 IPR002068 -
Seca4g02677 227 MobiDBLite consensus disorder prediction 165 187 - -
Seca4g02677 227 SUPERFAMILY HSP20-like chaperones 104 226 IPR008978 -
Seca4g02677 227 PANTHER 26.5 KDA HEAT SHOCK PROTEIN, MITOCHONDRIAL 1 227 IPR044587 GO:0009408
Seca4g02677 227 FunFam 26.5 kDa heat shock protein, mitochondrial 86 226 - -
Seca4g02677 227 Pfam Hsp20/alpha crystallin family 129 227 IPR002068 -
Seca4g02677 227 MobiDBLite consensus disorder prediction 37 60 - -
Seca4g02677 227 Gene3D - 87 227 IPR008978 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g02677 Seca-Chr4 46089308 46090735 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g02677 K13993 - gmx:548078 363.229
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g02677 4 46089308 46090735 Seca4g02677 4 46089308 46090735 ECH