Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g02613 ATGGCAATGGAAGTTACTCAAGTTCTTTTGAATGCTCAATCCATTGATGGAACTGTACGGAAGCATGCCGAAGAAAGTCTGCGACAATTTCAGGAGCAAAACCTTCCTGGTTTCTTGGTCTCTCTCTCTGGAGAGTTAGCAAGTGAAGATAAGCCAGTTGATAGCCGAAAGTTGGCAGGTTTGATACTTAAAAATGCATTAGATGCCAAGGATGAAAACAGAAAGCGGGAATTGGTCCAAAGATGGTTGTCACTGGATCCTGCTGCAAAGACCCAGATTAAGTCATGCTTGCTGCAAACACTCACTTCTCTTGCACCTGATGCTCGGTCTACAGCTACTCAAGTTATTGCTAAAGTTGCTGGAATTGAGCTTCCTCAGAAACAGTGGCCTGAGCTGATAGGATCGCTTTTATCAAATATTCACCAAGTTCCATCTCATGTCAAGCAAGCAACTTTGGAGACTCTGGGGTATTTGTGTGAGGAAGTCTCTCCTCAGGTTGTTGATCAAGACCAAGTAAATAAAATACTTACTGCTGTAGTTCAAGGTATGAATGCATCTGAAAGGAACAATGATGTTAGGCTTGCTTCTACTAGGGCATTATATAATGCTCTTGGATTTGCTCAGGCTAATTTTAGCAATGACATGGAGCGTGATTATATCATGAGAGTTGTTTGTGAGACAACTATGTCTCCCGAAGGGAAAATACGACAGGCAGCTTTTGAATGTTTGGTCTCAATTGCTGCCATGTATTATGAGAAATTGGCTCCTTACATCCAGGATATATTTAACATCACAGCAAAGGCTGTTAGGAGTGATGAGGAGGCTGTTGCTCTTCAAGCCATTGAATTTTGGAGCACAATTTGTGACGAGGAGACTGATATCTTGGAAGAATATGTGGGTGATTCCACTGGGGACTCTGATATACCTTGTTTTTATTTCATTAAGCAAGCTCTTCCTGCTCTTATCCCTCTGCTATTGGAAACATTACTCAAACAAGAAGAGGATCAGGATCTGGATGAAGGTGCATGGAATATTGCAATGGCAGGTGGTACATGCCTTGGTTTAGTTGCTCGTACTGTTGGAGATGATATTGTGCCTCTGGTAATGCCCTTCATTGAGGAGAATATTACGAAACCGGATTGGAGACAGAGGGAGGCATCCACTTATGCATTTGGCTCTATCTTGGAAGGGCCTTCCCCAGACAAATTAGTACCTCTTGTTAATCATGCTTTACCATTTATGCTTAGTGCTTTAGTGAAGGATCCAAACAACCATGTAAAAGACACCACTGCTTGGACTTTGGGACGAATGTTTGAATTTCTTCACAGTTCAATTGTTGGTACACCAATTATTAATGAGGGAAACTGCCAACAGATTATTACAGTTCTCCTTCAGAGCATGAAGGATGTCCCCAATGTTGCTGAGAAAGCCTGTGGTGCTCTGTATTTTCTTGCCCAGGGTTATGAGGATGTGGGAGTGGCATCTCCTCTAACTCCCTTCTTTCAGGATATTGTTCAATCCCTTCTCACTGTTACCCACAGAGAGGATGCTACAGAATCACGATTAAGAACTGCAGCATATGAAACATTGAATGAAGTAGTAAGGTGTTCAACAGATGAAACAGCCTCTTTGGTGTTACAACTAGTTTCTGTCATCATGATGGAGCTGCACAAATGTCTTGAAGCACAAAATCTTTCATCTGATGAAAGAGAAAAGCAGGGTGAACTTATAGGCCTTCTTTGTGGGTGCTTGCAAGTAATTATTCAGAAGCTAGGGTCTTCAGATGCTACCAAATATGTTTTCTTGCAGTATGCTGATCAGATAATGGGACTATTCTTCAGGGTATTTGCTTGTAGAAATGCCACTGCACATGAGGAGGCCATGCTAGCCATTGGAGCACTTGCCTATGCAATAGGCCCTGATTTTGCTAAATACATGCCCGAATTTTACAAGTTTCTGGAGATGGACCTTCAGAATTTTGAGGAGTACCAAGTTTGTGCTGTCACTGTTGGTGTGGTAGGGGACATATGCAGGGCTTTGGAGGATAAAATACTGCCTTATTGTGATGGGATTATGACCCAGCTTCTTAAGAATTTGTCAAGTGATAATTTGCACCATTCTGTGAAACCCCCATTATTCTCATGCATTGGTGATGTAGCTCTTGCAATAGGAGATAACTTTAATAAGTACTTAATGTATGCAATGAACACACTACAGCTTGCTGCAGAGATGTACGCCCACGCGTCAGGTTTTGATGATGAAATGACAGAGTACATTAATTCTTTGAGAAATGGAATATTAGAGGCATATTCTGGGATTTTTCAAGGGTTTAAGAATTCATCAAAAACCCAGCTCTTGATTCCTTATGCTCCTCACATTCTCCAGTTCTTGGATAGCATATACATGGAAAAAGACATGGGATGA 2424 0.4158 MAMEVTQVLLNAQSIDGTVRKHAEESLRQFQEQNLPGFLVSLSGELASEDKPVDSRKLAGLILKNALDAKDENRKRELVQRWLSLDPAAKTQIKSCLLQTLTSLAPDARSTATQVIAKVAGIELPQKQWPELIGSLLSNIHQVPSHVKQATLETLGYLCEEVSPQVVDQDQVNKILTAVVQGMNASERNNDVRLASTRALYNALGFAQANFSNDMERDYIMRVVCETTMSPEGKIRQAAFECLVSIAAMYYEKLAPYIQDIFNITAKAVRSDEEAVALQAIEFWSTICDEETDILEEYVGDSTGDSDIPCFYFIKQALPALIPLLLETLLKQEEDQDLDEGAWNIAMAGGTCLGLVARTVGDDIVPLVMPFIEENITKPDWRQREASTYAFGSILEGPSPDKLVPLVNHALPFMLSALVKDPNNHVKDTTAWTLGRMFEFLHSSIVGTPIINEGNCQQIITVLLQSMKDVPNVAEKACGALYFLAQGYEDVGVASPLTPFFQDIVQSLLTVTHREDATESRLRTAAYETLNEVVRCSTDETASLVLQLVSVIMMELHKCLEAQNLSSDEREKQGELIGLLCGCLQVIIQKLGSSDATKYVFLQYADQIMGLFFRVFACRNATAHEEAMLAIGALAYAIGPDFAKYMPEFYKFLEMDLQNFEEYQVCAVTVGVVGDICRALEDKILPYCDGIMTQLLKNLSSDNLHHSVKPPLFSCIGDVALAIGDNFNKYLMYAMNTLQLAAEMYAHASGFDDEMTEYINSLRNGILEAYSGIFQGFKNSSKTQLLIPYAPHILQFLDSIYMEKDMG. 808
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g02613 807 Gene3D - 1 807 IPR011989 -
Seca4g02613 807 Pfam HEAT-like repeat 381 437 - -
Seca4g02613 807 SMART IBN_N_2 23 103 IPR001494 GO:0006886|GO:0031267
Seca4g02613 807 ProSiteProfiles Importin-beta N-terminal domain profile. 23 103 IPR001494 GO:0006886|GO:0031267
Seca4g02613 807 Pfam Importin-beta N-terminal domain 23 102 IPR001494 GO:0006886|GO:0031267
Seca4g02613 807 SUPERFAMILY ARM repeat 3 804 IPR016024 -
Seca4g02613 807 PANTHER IMPORTIN BETA 6 803 IPR040122 GO:0006606
Seca4g02613 807 FunFam Importin subunit beta-1 3 807 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g02613 Seca-Chr4 44726193 44728847 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g02613 K14293 - gmx:100785130 1481.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g02613 4 44726193 44728847 Seca4g02613 4 44726193 44728847 ECH