Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g02592 ATGGGCGAGACCAAAATGGAGGACATGCCGTTGCCGGCGCTATTTGAACAAGCCCGGAAGATTCACCAAACAGCCACGGAGTCCGGGGCTGACCAGGAGCTTGTGAAGAAGGGCTGCGAGGCCCTGAATAGGTGCGATGACATGGTTAATAAGTTGGGTTTGTTCTCTTCCAATGAAACCAAAGACGATATCAGCACCGCTAATCTCAAGTACATTCTGGTGCCATTTTATCTTGCTGAGTTGACTGAAAAAATAGCACAGGATGACAGGATACAGATTATAAAGGCTTCCAAGGCAAAACTAAAGGAATTTATCTCATTTTGTGAGGCAATGGAGCTGGTCCCAAAAGAGGAGTTAGAATCTTATATGGAAGGGGCACCAAAATCTGTTGCTGATCAGAGGGCCAGAAAGATTGCTAGATTTAAACGTCAAAGAGCTGCTGAGTCAAAGTTGTTGGAAATAAAAGAGCGAAAAGAACGGCGTGGGCGTTCTACTAAAGCAGCTGCCTTGTCCACCCCTGTTGAGGCAGGAGAGGAAGAAGTATTGGATGATGATGGAGAAGAAGAAAGAGAGGCTTGGAATACTACCATATCTTTGGCAATCTGTAAGGCATTGGATCTGCTTGAAATGTTAAAGAAAGAGGAAGAGATGCTTTCTGCTGTAAAGGAGAGACAATCCAAGGATGGGGATAAGGAGTTCTCTAAGGAAGTTCTTGATGAACGTGCCAAGAAAGCAGAAGCTTGGCATCGTGATGCTGCAGTTCGTGCACAGTACACTAAGCCATCCCCACCAATCACATGTGCGACTTTTGCTCAAGATGTTCTTGAAGGAAGAGCACAAGCTTCACAGGCACATGAGCACAAACACCAACCACTAATATTTGGACCAGCCAGCCTTGTCAATGGAAGTTTAGCAACTGATAGAGAAAGAATGGCAGCTCAGGTCTTCCAACCCAGTCATAGGCCAGGAAAACCAAATCTCATAGTAATGGTTGAGATTGAGAAGGAAGTTTCTGTTTTGGATAGAATTTGGCATGACAAGAGTGATGCTGATAGCATGTATCCCATGTATTTTGGTGTCTCTTGTGCATTCTTTGCCCTTCAAGTCCTCACAGAACAACATGTTGAAGTTGAAAGATGGTCTGGAATTAGGGATACCATGCTTCAAGGAAGTGCACAGCTCTTGGGGTTGATTGTGTGGAGAGTTCAGAAGGGAGTTCCAAATGGGGGAGAAAGCAAGCTCATGAGTGCTGAGAGAGAAGTTGAAAATCTGAAAAGGATGAGGCATGAGGATGCCAAAGCCAATGAGAAAGTTGTGAGCATATTTGCTGCACAGGAACAAAGCTGGTTCAGTGAAAGGAGGAAACTCCGCCAGCAGATTGGAGCTCTATTGAATGAGTTGAGAGTTTTTGAGAAAAACAAGGATGCAGATGTTTCTGAATTGGATCAGAAATTGAAGGAAATGGAGGTATTGGTGGAGTCTAGGGACAAGGAGATTGAAGAAAAGGAGCAGAAGAGGAAGGAGTTAGAAGAAAAGCTGATCAAGGCTGAAAGGGATGCTGAAGAATTGAGAGAATCTGCTAGGCGTGAAGCTCAAGAGCATTCTTCTGATCTCAGGAAGCATAAAACTGCTTTCATTGAGTTGGTGTCAAACCAAAGGCACCTTGAGGCTGAACTGGGTCGTGCGGTCAAGCAAGTGGAAGCTACAAAACAGGATCTTCTTTCTGTCATGGAGAAGAAGGAAGAGTCAGATTTGATGGCCCAGAAATTATCTATGGAGATTGCAAAATTCCACAAGGATTTGGAACAAAAAGATAAAATTTTGTCAGCAATGTTGAGGAAATCTAAGCTTGATACTGCTGAAAAACAAATGCTGTTAAAGGAGGTTAAAGTATCAAAGGCTAGGAGGAAGCAAGCAGAACAGGAAACAGAAAAGTGGAAAGCAGTTTCAGAAGTAAAGCAAGACAGACATTCCCTGAAAAACATGTTACTGAACTTGAGTTCAAGGATGGATGTTTTCCCTGGTGGTAGAGGTATGCAACCTAGTTCAACAGGATCCTCACACATTGCAAAGGAACCAGAACAACAATTTTCACCCTTTTCTGATCATTACTTGCCACAAAGAAATGAAGACTCATCCATTACTGCTAATGCTAAGCGTATGGAAGATTGGATGCGAGCTGAGGCAGAAAGATATGCAACCCTGATTGAACAGAGGCATCACTTAGAGCTAGATGCATTTGCAGAACAAATGAGACTCAAAGATGAGAAATTAGAGGCATTTCGGTGGCAGTTGTTAAGAACAGAATTAGAAACAAAGCAGCTACAGTCCCACATGGAGGGACTAGTCAAGGATGTGACACAGCTAAGACATGACAAGATGAAATTGGAGACCTTATTGTTAGAAAGAGAAGATGAACTGACTTCCCTGAAAGAGCAATTTTCATCAAAATTGAGGCCCTTAAACTGCTATAGAAATAACTCAAATTTGCCTACAGAACTGGCCCAAGATGCTGTCTGGTCCAGAGTCAAGGTTGTCAAGAGAAAACCAGGTGAAAAGGAGCTAGAAATTATGGAAACTTTGATTGAGGAAGATTGTGAAAAGGTAGTACACTCCCTACCCCATGATCAGTTAAACAATTCTAATTTACTAGTTCAATCTCCAGAAAATAAGAAAGAAGAGGAAAAGGATGTTTCTGTGGTGAATAGTCCTACTCCTTTGCAAAATCAAAGTCCAAATCAAGTAGAAGTTGATGCTGCTGAAAAGACAGGATCTACCAGCCAGCCCTTTAATAACACAAAACAATCTTCATGGAAGATGGATCTTCATGCTCTTGGAATTTCTTACAAGATCAAGAGGCTGAAACAACAACTTATTCTTGTTGAAAGGTTAACAGGAAGGCAAACCAATGATGAAAACACAGAAATCAGTGATGATAGCAAAGCTGGTATAAAGGCTTATCTTTCCTTGACTACTTTGCTGAATAAACAAGTTGGAAGATATCAATCCCTCCAAGAGAAAACTGATGACCTTTGTAAACGGATGCATGAGAATGATCTCTATGCAAATCGTGGAGATCATATGAATGGTGCAAGAACAAAGGAGAAAACATCAACACTGGAGCACTTTTTAGAGGAGACATTTCAACTACAGAGATACATTGTTGCAACAGGACAAAAATGGATGGAAATTCAATCCAAGATTGTTTGTGGATTTGTTGGGGTGGCAGAAGAGATGGAAAAAAGTGGTGGCATTGACATGAAACGCTTTGCTGATAGTATAAGAAATATGTTCCACGAAGTTCAAAGAGGTCTAGAAGTTCGGACGGCTAGGATTATAGGAGACCTTGAGGGAACACTAGCTCGTGACGGCATGATATGTTTGAGAAGCTAG 3393 0.4206 MGETKMEDMPLPALFEQARKIHQTATESGADQELVKKGCEALNRCDDMVNKLGLFSSNETKDDISTANLKYILVPFYLAELTEKIAQDDRIQIIKASKAKLKEFISFCEAMELVPKEELESYMEGAPKSVADQRARKIARFKRQRAAESKLLEIKERKERRGRSTKAAALSTPVEAGEEEVLDDDGEEEREAWNTTISLAICKALDLLEMLKKEEEMLSAVKERQSKDGDKEFSKEVLDERAKKAEAWHRDAAVRAQYTKPSPPITCATFAQDVLEGRAQASQAHEHKHQPLIFGPASLVNGSLATDRERMAAQVFQPSHRPGKPNLIVMVEIEKEVSVLDRIWHDKSDADSMYPMYFGVSCAFFALQVLTEQHVEVERWSGIRDTMLQGSAQLLGLIVWRVQKGVPNGGESKLMSAEREVENLKRMRHEDAKANEKVVSIFAAQEQSWFSERRKLRQQIGALLNELRVFEKNKDADVSELDQKLKEMEVLVESRDKEIEEKEQKRKELEEKLIKAERDAEELRESARREAQEHSSDLRKHKTAFIELVSNQRHLEAELGRAVKQVEATKQDLLSVMEKKEESDLMAQKLSMEIAKFHKDLEQKDKILSAMLRKSKLDTAEKQMLLKEVKVSKARRKQAEQETEKWKAVSEVKQDRHSLKNMLLNLSSRMDVFPGGRGMQPSSTGSSHIAKEPEQQFSPFSDHYLPQRNEDSSITANAKRMEDWMRAEAERYATLIEQRHHLELDAFAEQMRLKDEKLEAFRWQLLRTELETKQLQSHMEGLVKDVTQLRHDKMKLETLLLEREDELTSLKEQFSSKLRPLNCYRNNSNLPTELAQDAVWSRVKVVKRKPGEKELEIMETLIEEDCEKVVHSLPHDQLNNSNLLVQSPENKKEEEKDVSVVNSPTPLQNQSPNQVEVDAAEKTGSTSQPFNNTKQSSWKMDLHALGISYKIKRLKQQLILVERLTGRQTNDENTEISDDSKAGIKAYLSLTTLLNKQVGRYQSLQEKTDDLCKRMHENDLYANRGDHMNGARTKEKTSTLEHFLEETFQLQRYIVATGQKWMEIQSKIVCGFVGVAEEMEKSGGIDMKRFADSIRNMFHEVQRGLEVRTARIIGDLEGTLARDGMICLRS. 1131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g02592 1130 MobiDBLite consensus disorder prediction 901 934 - -
Seca4g02592 1130 Coils Coil 793 813 - -
Seca4g02592 1130 Coils Coil 414 434 - -
Seca4g02592 1130 Coils Coil 485 544 - -
Seca4g02592 1130 MobiDBLite consensus disorder prediction 158 187 - -
Seca4g02592 1130 Coils Coil 453 473 - -
Seca4g02592 1130 Coils Coil 622 642 - -
Seca4g02592 1130 MobiDBLite consensus disorder prediction 888 934 - -
Seca4g02592 1130 PANTHER RIBONUCLEASE P PROTEIN SUBUNIT P38-LIKE PROTEIN 347 1129 - -
Seca4g02592 1130 FunFam PP2A regulatory subunit TAP46 10 232 - -
Seca4g02592 1130 Coils Coil 204 224 - -
Seca4g02592 1130 Coils Coil 563 583 - -
Seca4g02592 1130 Gene3D - 10 232 IPR038511 -
Seca4g02592 1130 Pfam TAP42-like family 11 321 IPR007304 GO:0009966
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g02592 Seca-Chr4 44463576 44476034 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g02592 - - gmx:100815082 1228
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g02592 4 44463576 44476034 Seca4g02592 4 44463576 44476034 ECH