Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g02512 ATGGCAGAGAGCCTTCGCTTGGCTGTTGCTGTTCTTGGCAATGCTGCCTCAGTAGCACTTTATGCTGCACCAATGGTTACTTTTAAAAGGGTTATAAGGAAGAAAAGCACAGAGGAGTTTTCATGCATTCCTTACATCATTGGACTCTTAAACTGTCTCCTCTTCACTTGGTACGGATTGCCTGTTGTAAGCTACAAGTGGGAAAATTTCCCTCTGGTCACAGTTAATGGAGTTGGGATTGTTCTTGAGTTATCCTATGTTCTCATTTATTTCTGGTATGCCTCAGCTAAAGGAAAGGTAAGCTATATGCTCCAACCTCTTTTTTCAAGTTCTTCTCTTCATGTGTTACAAGGTTTTACAAATGTAGCCATGACTACAATACCAGTTCTGCTTGTGTTCTGCATAACTGCTGCAGTTTCAGCTTTTGCTTTCCATGATAGTCGTCACCGAAAGCTACTCGTTGGTAGCTTAGGCTTAGGTGTCTCTGTTGCAATGTACGGATCTCCTCTCGTTGTAATGAAAAAAGTTATACAAACCAAGAGTGTGGAATTCATGCCTCTACCGTTATCATTGTGCACATTCTTGGCGAGTGCACTCTGGTTGACTTATGGAATTCTCATCCGTGATGTATTTGTTGCGGGGCCAAGTGTGATTGGAACTCCATTAAGCATCCTTCAGCTTGTGCTACACTGCAAATACCGGAAAGGGAGTGTTGTTGTGGTGGAAGAAGCAAATAAGGAAAAGGAAAAGGGTAACTTAGAGAAGGTGGACTTGGAAATGGGGGACGTGGAAAAGAATGTGACAAATCATAGCAACGGCAACTCGTGA 828 0.4275 MAESLRLAVAVLGNAASVALYAAPMVTFKRVIRKKSTEEFSCIPYIIGLLNCLLFTWYGLPVVSYKWENFPLVTVNGVGIVLELSYVLIYFWYASAKGKVSYMLQPLFSSSSLHVLQGFTNVAMTTIPVLLVFCITAAVSAFAFHDSRHRKLLVGSLGLGVSVAMYGSPLVVMKKVIQTKSVEFMPLPLSLCTFLASALWLTYGILIRDVFVAGPSVIGTPLSILQLVLHCKYRKGSVVVVEEANKEKEKGNLEKVDLEMGDVEKNVTNHSNGNS. 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g02512 275 Gene3D - 10 105 - -
Seca4g02512 275 PANTHER RAG1-ACTIVATING PROTEIN 1 17 247 IPR047664 -
Seca4g02512 275 FunFam Bidirectional sugar transporter SWEET 150 243 - -
Seca4g02512 275 FunFam Bidirectional sugar transporter SWEET 7 99 - -
Seca4g02512 275 Gene3D - 153 245 - -
Seca4g02512 275 Pfam Sugar efflux transporter for intercellular exchange 153 235 IPR004316 GO:0016020
Seca4g02512 275 Pfam Sugar efflux transporter for intercellular exchange 10 97 IPR004316 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g02512 Seca-Chr4 42999169 43001414 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g02512 1 275 Miscellaneous Gene Families AT5G53190 50.177 7.36e-97 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g02512 K15382 - gmx:100813119 412.149