Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g02498 ATGGACTACGATTTCAGAAGCAGGTCGGGCCCACAAGTTCCGATGTACCGTCCGCCACCGTCGTCTTCTGCTCCGTCGTCCATGTACCCCAAGATCGGCCCCCACGGCCACCACGCCGCCGTCCCCGTCGGCCGTCCTTCACCCTATCACCAGAATTCCACTCCTCCTTCCTCTTCTTCTTCAGGATTGGGCATAAAGGTTGCTGTAAAGCCAGAATATAGGATCACACCGCCGCCTCATTTATCACCACATGCGGGAGATATTCCACGGAGTAACTTCCAATTTGATTTTGGATTGGAGAGAAAAATTTTGGCTGAAGCAGAGAAGGATAACCCAAACTGGAGCAAATTTGGATTAGACAATCTACCAACTAAAGTTCCCGAGACATCATCATCTAAGGTTCCTGCTTCAGATCCCATTGTGAGCAAATATATAGCCATGGGGCTTAGCCGAGAGGCCGTTCCCATTGCTGTTGCACATTATGGTGATAATCCAACCAAAGTTCAGGAATTTGTCAATGGATATACGCTTCTGCGTGAAATGGGATTTTCATCAAGCAGCGTTGCTGAAGCCTTGGTTATGCATGACAATGATACAGACAAGGCACTAGCACATTTCCTTAATGGCTCATCATGA 636 0.4827 MDYDFRSRSGPQVPMYRPPPSSSAPSSMYPKIGPHGHHAAVPVGRPSPYHQNSTPPSSSSSGLGIKVAVKPEYRITPPPHLSPHAGDIPRSNFQFDFGLERKILAEAEKDNPNWSKFGLDNLPTKVPETSSSKVPASDPIVSKYIAMGLSREAVPIAVAHYGDNPTKVQEFVNGYTLLREMGFSSSSVAEALVMHDNDTDKALAHFLNGSS. 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g02498 211 MobiDBLite consensus disorder prediction 47 63 - -
Seca4g02498 211 MobiDBLite consensus disorder prediction 1 63 - -
Seca4g02498 211 CDD UBA2_UBAP1_like 171 207 - -
Seca4g02498 211 SUPERFAMILY UBA-like 167 209 IPR009060 GO:0005515
Seca4g02498 211 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 167 209 IPR015940 -
Seca4g02498 211 Gene3D UBAP1 SOUBA domain 130 210 IPR042575 -
Seca4g02498 211 FunFam Ubiquitin-associated/translation elongation factor EF1B protein 133 210 - -
Seca4g02498 211 PANTHER LD44032P 26 209 IPR038870 GO:0000813|GO:0043130|GO:0043162
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g02498 Seca-Chr4 42634813 42638801 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g02498 - - aprc:113852741 332.798
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g02498 4 42634813 42638801 Seca4g02498 4 42634813 42638801 ECH