Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g02497 ATGCAGAGCCGGGGATCTAGCCACCGACTTTCCACTATGGCTAATCGATCCCGTATTCCTGCACTCCTCATCTCCATGTTTGCTACTTTCGCTTCCATCTACGTCGCTGGAAGGTTGTGGCAGGACTCAGAGAACCGGGTTTATCTCATCAAAGAGCTCGATAGGATTACTGGTCAGGGACAATCTGCTATATCAGTGGATGATACACTGAAGATCATAGCCTGCAGGGAGCAACATAAGAAGCTTGACGCCCTTGAGATGGAACTTGCAGCAGCTAGACAAGAGGGTTTTGTTTCAAAGCGCTTGATAGAGACTAATGGGACTTACTCTGAGAGAAGGCCCTTGGTAGTGATAGGTATACTGACAAAGTTTGGCCGCCAGAAGAATAGAGATGCAATTCGTAAGGCATGGATGGGAAGCGGTGCAGCTTTGAAGAAAACTGAAGAAGGAAAGGGCATAGTTGTGCGATTTGTTATTGGTAGAAGTGCAAATCGCGGGGACAGTCAGGATAAAGACATTGATCGTGAGAATAGGCTCACAAATGACTTCCTAATTCTTGATAATCATGTTGAAGCAAATGAGGGACTCCCAATGAAGGCTAAATTGTTCTTTGCTCATGCTGCAGACAAATGGGATGCTGAATTTTATGCTAAAGTCAATGATGATGTTTATGTAAATATTGATGCCTTGGGAGCTACACTTGCAACTCATTTGGACAAACCTCGTGTTTACATTGGATGCATGAAATCAGGCGAAGTTTTCTCTGAACCGAACCATAAATGGTATGAACCAGAATGGTGGAAGTTTGGTGACAAAAAATCATATTTTCGCCATGCATCAGGCGAGATGTATGTCATATCACGAGCTTTGGCTAAATTCATATCAATAAATAGGTCAGATTCACTCTTTTTTGCATCTATATTGTTATCTACTGTTTAA 939 0.4271 MQSRGSSHRLSTMANRSRIPALLISMFATFASIYVAGRLWQDSENRVYLIKELDRITGQGQSAISVDDTLKIIACREQHKKLDALEMELAAARQEGFVSKRLIETNGTYSERRPLVVIGILTKFGRQKNRDAIRKAWMGSGAALKKTEEGKGIVVRFVIGRSANRGDSQDKDIDRENRLTNDFLILDNHVEANEGLPMKAKLFFAHAADKWDAEFYAKVNDDVYVNIDALGATLATHLDKPRVYIGCMKSGEVFSEPNHKWYEPEWWKFGDKKSYFRHASGEMYVISRALAKFISINRSDSLFFASILLSTV. 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g02497 312 Coils Coil 75 95 - -
Seca4g02497 312 Gene3D - 110 305 - -
Seca4g02497 312 Pfam Domain of unknown function (DUF4094) 18 94 IPR025298 -
Seca4g02497 312 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 82 297 IPR002659 GO:0006486|GO:0016020|GO:0016758
Seca4g02497 312 Pfam Galactosyltransferase 129 304 IPR002659 GO:0006486|GO:0016020|GO:0016758
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g02497 Seca-Chr4 42628006 42633716 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g02497 22 298 Glycosyltransferase AT5G53340 72.924 3.34e-154 433
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g02497 K20854 - gmx:100779561 553.518
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g02497 4 42628006 42633716 Seca4g02497 4 42628006 42633716 ECH