Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g02488 ATGAAGAGGAGCAGAGACATGGAGAAGAGTTCAGAGATAAGCTCTGTTATTGAAGAGCTGTCTATGCTGGTTATTGTTAAACCTGGAGCAAATCATGAGGCTGCACACATCCCCACCAAGCCTTTCCTATCTATATGTTACTTGGTTCTACAAGTTCTTGATAAGATAGGGCCAACAATGGCTGTTTTGAGACAGGACATTCACCAGAATATTAAGAGGTTGGAAGTGATGCATGAATCAAATCCCTCAATGAATTCAAATCTGGTTGAGATATTGAAATCAGAAGCTAGCAAAGGCAACGCAAGGAAAAGGACTAGCTGCAGTAAAGCCTTTGTTTGGCTCACAAGATCCCTGGATTTCTCCTCAGCATTGTTACAAGGGCTAGCAAAAGACCCTAAAAAGAATATGGAGCAAGTAGTTCAAGAATCTTATGCTGCAACTTTAGCACCATGGCATGGATGGATTTCATCCGCTGCTTTCAGAGTGGCTCTAAAACTAGTTCCTGATATTAAAACTTTCTTGGATCTCCTCAGGGAAAAAGATGAAAACTGTGACACCCTAAAGGAGAAAATGCAGATCATGGTTTCTTTGCTTGTGCCTTTTCTTGAGGACATCCATTCTATTCTAGTAAGCATAATTTTGTTTTTCCTGGCATATCACATATCATCAATTGGTCTTGCTCATTGGACTTCCTGTCATCTGCTTAACTTGTGA 714 0.4048 MKRSRDMEKSSEISSVIEELSMLVIVKPGANHEAAHIPTKPFLSICYLVLQVLDKIGPTMAVLRQDIHQNIKRLEVMHESNPSMNSNLVEILKSEASKGNARKRTSCSKAFVWLTRSLDFSSALLQGLAKDPKKNMEQVVQESYAATLAPWHGWISSAAFRVALKLVPDIKTFLDLLREKDENCDTLKEKMQIMVSLLVPFLEDIHSILVSIILFFLAYHISSIGLAHWTSCHLLNL. 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g02488 237 PANTHER GLYCOLIPID TRANSFER PROTEIN-RELATED 8 208 IPR014830 GO:0005737|GO:0120009|GO:0120013
Seca4g02488 237 Gene3D Glycolipid transfer protein 1 213 IPR036497 -
Seca4g02488 237 Pfam Glycolipid transfer protein (GLTP) 37 178 IPR014830 GO:0005737|GO:0120009|GO:0120013
Seca4g02488 237 SUPERFAMILY Glycolipid transfer protein, GLTP 32 210 IPR036497 -
Seca4g02488 237 FunFam Glycolipid transfer protein 2 2 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g02488 Seca-Chr4 42401879 42404051 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g02488 12 211 Acyl Lipid Metabolism Gene Families AT2G34690 21.891 5.37e-07 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g02488 - - gmx:100527808 345.895
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g02488 4 42401879 42404051 Seca4g02488 4 42401879 42404051 ECH