Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g02465 ATGGCAACAGCCTTGTCCACAACCAGTGTGCTTTCCTGGAGGAATCCACAGCACATGCATATTCCACCCTCTTCACAAACACTTTGTCACTCTTCTGTCCAAAATGGGATTCTAAAAACTGTAGCTGCTTCAGTTTCAAAAGACAGTTCTTTGATTAACGGAGAAAGCGAGAAAGGTTCCTCTTTGTTGGTTAACAGAAGAGCAGTCTTAGCTTCTTCAGCGGTTTCCTTATTGGGTTTTTCAGGAGAGAGTTTGGCTGTGGTGAAACAAGGTCTTCTAGCAGGGAGAATTCCTGGCCTGTCTGAGCCAGATGAACAAGGTTGGAGGACTTATCGCAGGCCAGATGAGAAATCAGGAGGACATGGTGTTGGATGGAGTCCTATTATCCCATACACTTTCTCAGTCCCTCAAGAATGGGAAGAGGTACCGGTATCAATAGCAGATCTTGGTGGCACAGAGATAGATTTGAGATTTGCCAGCACTAAGGAAGGACGGCTGTTTGTTATTGTCGCTCCTGTTCTTAGATTCTCTGATAATCTTGGTGATGATGCTACAATAGAAAAAATCGGACCTCTAGACAAAGTGATCAATGCGTTTGGTCCAGAAGTGATTGGGGAAAATGTAGAAGGGAAGGTTCTTAGTGCAGGTGTAGCAGAACATGAAGGAAGAGCTTACTACCAGTATGAGCTAGAGCCCCCTCATATTTTTATTACTGCCACTGCAGCTGGCAATCGCCTATACTTGTTTGCTGTAACCGGCAGTGGCCTTCAATGGAAGAGACACTACAGTGATTTGAAGAAGATAGCTGAATCTTTTCGAGTTGTATAA 828 0.4432 MATALSTTSVLSWRNPQHMHIPPSSQTLCHSSVQNGILKTVAASVSKDSSLINGESEKGSSLLVNRRAVLASSAVSLLGFSGESLAVVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGHGVGWSPIIPYTFSVPQEWEEVPVSIADLGGTEIDLRFASTKEGRLFVIVAPVLRFSDNLGDDATIEKIGPLDKVINAFGPEVIGENVEGKVLSAGVAEHEGRAYYQYELEPPHIFITATAAGNRLYLFAVTGSGLQWKRHYSDLKKIAESFRVV. 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g02465 275 Pfam PsbP 131 274 IPR002683 GO:0005509|GO:0009523|GO:0009654|GO:0015979|GO:0019898
Seca4g02465 275 SUPERFAMILY Mog1p/PsbP-like 123 274 IPR016123 -
Seca4g02465 275 Gene3D Mog1/PsbP, alpha/beta/alpha sandwich 127 275 - -
Seca4g02465 275 PANTHER - 29 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g02465 Seca-Chr4 42107640 42111207 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g02465 - - pvu:PHAVU_009G134500g 460.685
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g02465 4 42107640 42111207 Seca4g02465 4 42107640 42111207 ECH