Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g02458 ATGGAGGTTGCACATTTTTTGTTTGGCATATTTGGGAATGCTTCCGCTCTGTTCCTTTTCTTGGCACCAGTGATCACATTCAAGAGGATTATAACCAACAAATCCACAGAGAAGTTCTCGGGCATTCCATATGTCATGACCCTACTCAACTGTCTCCTTTCTGCTTGGTATGGTCTACCTTTTGTGTCTCCCAACAATATACTGGTATCAACAGTGAATGGCACCGGGGCAGTTATTGAAATCATATATGTTTTTATCTTCATCGTATTGGCACCAAGGAAGGAAAAGGCTAAAATTCTTGGCCTATTCACCTTTGTACTCTCCGTGTTCTCTGCTGTTGTTTTTGTGTCCCTTTTTGCCCTGCATGGCCTTTCCAGGAAGCTCTTCTGCGGTTTCGCTGCTGCCATATTTTCTGTAATCATGTATGGTTCACCACTCTCAATTATGGTAAGCAATGTGCAGAGACTAGTGATAAAAACTAAGAGTGTGGAGTTCATGCCATTCTTCTTGTCGCTGTTTGTGTTTCTCTGCGGCACTTCCTGGTTTATCTTCGGTCTGCTAGGCCGTGACCCATTTGTTGCTGTACCAAATGGTGTTGGTTCTGCTTTGGGAACAATGCAATTAATATTGTATTTCATTTATCGTGACAAGAAAGGTGTTCCAAGGAAACAGGCCCAAACAGAAGAGGAATCCATAGAGATGGGCGATGCAAAACCCCATCAAGGGAAGCAATCCAATGCTAATGGAACTCAAGGATGA 759 0.4308 MEVAHFLFGIFGNASALFLFLAPVITFKRIITNKSTEKFSGIPYVMTLLNCLLSAWYGLPFVSPNNILVSTVNGTGAVIEIIYVFIFIVLAPRKEKAKILGLFTFVLSVFSAVVFVSLFALHGLSRKLFCGFAAAIFSVIMYGSPLSIMVSNVQRLVIKTKSVEFMPFFLSLFVFLCGTSWFIFGLLGRDPFVAVPNGVGSALGTMQLILYFIYRDKKGVPRKQAQTEEESIEMGDAKPHQGKQSNANGTQG. 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g02458 252 FunFam Bidirectional sugar transporter SWEET 7 97 - -
Seca4g02458 252 MobiDBLite consensus disorder prediction 220 252 - -
Seca4g02458 252 FunFam Bidirectional sugar transporter SWEET 126 224 - -
Seca4g02458 252 Pfam Sugar efflux transporter for intercellular exchange 7 94 IPR004316 GO:0016020
Seca4g02458 252 Pfam Sugar efflux transporter for intercellular exchange 131 218 IPR004316 GO:0016020
Seca4g02458 252 Gene3D - 125 228 - -
Seca4g02458 252 Gene3D - 9 103 - -
Seca4g02458 252 PANTHER RAG1-ACTIVATING PROTEIN 1 16 226 IPR047664 -
Seca4g02458 252 MobiDBLite consensus disorder prediction 220 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g02458 Seca-Chr4 42010920 42014894 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g02458 1 195 Miscellaneous Gene Families AT1G21460 75.385 4.12e-103 296
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g02458 K15382 - gmx:100800304 434.491
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g02458 4 42010920 42014894 Seca4g02458 4 42010920 42014894 ECH