Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g02437 ATGGAAGTTCCTGTTGTGATTGTGGGTGCTGGTCCTGCTGGGTTAGCAACCTCTGGATGCCTTAACAAGCTTTCTATCCCTAACATTGTCCTTGAAAGAGATGATTGTCATGCCTCTCTTTGGAGGAATAGGACCTATGACCGTTTGAAACTTCACTTGGGCAAAGATTTCTGTAGCCTTCCCCATCTCCCTTTCTCATCTGATTTACCCACTTTTATCCCTAGGGTTGATTTCATGCGCTACCTTGATGACTATGTCACCCATTTCAACATCTCCATTCGCTACAACCGTTCCGTCGTGTCTGCTTCCATGGATTACACCTTTGGGAAATGGAGGCTCCTTGTTAAGGACACGTCATCAAATGTTGATGAGGTTTACGTTGCGGACTACCTAGTGGTTGCAACCGGAGAGAATAGCGAAGGGTACGTTCCCGAACTGGATGGGCTTGAAAGCTTTGAAGGTGAATACCTTCATTGCAGCAAGTATTTGAATGGAAGAGCTTGGTATAACAAAAATGTCTTGGTTGTTGGCTGTGGAAATTCTGGAATGGAGATCGCTTATGATCTCTCAAATTGGGGTGCAAATACCTCCATCGTTATTAGAAGCCCTGTGCATTATTTCACTAAAGAGATGGTGTTCGCGGGAATGCATATGCTGAAATACTTAAAAGTGGACAAGGTTGATAAGGTGATGGTGTTTATGAGCAAAATGGTGTACGGAGATATGTCCAAGTTCGGCTTGACCAGACCAAAGGATGGACCTTTTAGTATGAAAATCAAGGGTGGTCGTACGCCTACCATTGATGTCGGATGCGTCGAAAAGATTAAGAAAGGCAAAATAAAGGTTTACCCAGCTATTTCAAGCATCAAGAAAGACAAGATAATTGAGTTTGAAGATGGACAGAATGGTCAATTTGACGTTATAGTCTTTGCTACCGGATACAAAACCAATGTGCTGAAATGGCTTAAGGATTACAAAGATATGTTCAATGAAAATGGAATGCCGAAACCAACTTTTCCAAATCACTGGAAAGGAGAAAATGGAATCTACTGCGCTGGGTTTTCAAAGAGGGGATTAGAAGGCATTGCTTTTGATGCGAAGCAAATAGCTGCTGATATCAAGATGACTATGAATGCAAGGAAGATGCCTGCAGATACTGGGGCCAACACTGGACTCTTAGAAAACTGA 1188 0.4276 MEVPVVIVGAGPAGLATSGCLNKLSIPNIVLERDDCHASLWRNRTYDRLKLHLGKDFCSLPHLPFSSDLPTFIPRVDFMRYLDDYVTHFNISIRYNRSVVSASMDYTFGKWRLLVKDTSSNVDEVYVADYLVVATGENSEGYVPELDGLESFEGEYLHCSKYLNGRAWYNKNVLVVGCGNSGMEIAYDLSNWGANTSIVIRSPVHYFTKEMVFAGMHMLKYLKVDKVDKVMVFMSKMVYGDMSKFGLTRPKDGPFSMKIKGGRTPTIDVGCVEKIKKGKIKVYPAISSIKKDKIIEFEDGQNGQFDVIVFATGYKTNVLKWLKDYKDMFNENGMPKPTFPNHWKGENGIYCAGFSKRGLEGIAFDAKQIAADIKMTMNARKMPADTGANTGLLEN. 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g02437 395 PRINTS Pyridine nucleotide disulphide reductase class-I signature 4 26 - -
Seca4g02437 395 PRINTS Pyridine nucleotide disulphide reductase class-I signature 172 197 - -
Seca4g02437 395 PRINTS Pyridine nucleotide disulphide reductase class-I signature 131 140 - -
Seca4g02437 395 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 4 379 - -
Seca4g02437 395 Gene3D - 1 382 IPR036188 -
Seca4g02437 395 PRINTS FAD-dependent pyridine nucleotide reductase signature 5 24 - -
Seca4g02437 395 PRINTS FAD-dependent pyridine nucleotide reductase signature 172 190 - -
Seca4g02437 395 SUPERFAMILY FAD/NAD(P)-binding domain 4 278 IPR036188 -
Seca4g02437 395 Pfam Flavin-binding monooxygenase-like 5 317 IPR020946 GO:0004499|GO:0050660|GO:0050661
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g02437 Seca-Chr4 41672997 41675053 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g02437 K11816 - gmx:100801203 624.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g02437 4 41672997 41675053 Seca4g02437 4 41672997 41675053 ECH