Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g02391 ATGGCTTCCTCCCTAGGCGACAACTACAAGCTTCTCTCGCCTCAACAGCAAGAGTTGGTGAAGGTGCTGTTGGATAATGGCCAAGGTCACCTGTTTCGTGATTGGCCAGGTCCCGGCGTCGACGACGACGAGAAGAAAGCATTCTTCGACCAGCTGATTCGACTCAATTCGAGCTACCCTGGTGGCTTGGAAGCATACATTAAAAACGCTAAGCGACTCTTGGCTGATTCTAAAGCTGGAAAGAACCCTTTTGATGGCTTCACACCTTCTGTTCCAACGGGTGAGACCTTGACATTTGGTGATGAGAACTTCATCAAATTTGAGGAAACAGGTGTACGTGAGGCTCGGAAAGCTGCATTTGTTCTTGTTGCTGGTGGTCTTGGGGAGCGTCTAGGATACAGCGGGATTAAGGTTGCTCTTCCTGCAGAAACCACTACTGGAACATGTTTCTTACAGCATTACATTGAATCTATATTGGCACTTCAAGAAGCAAGCTCACAAGAGCTGTCAGGTGAATGCCAGACAAAAATTCCTCTTGTTATTATGACCTCTGATGACACCCATGGTCGTACCTTAGAACTATTAGAGTCAAATTCTTACTTTGGCATGCAACCCACACAAGTAACTCTTTTAAAGCAGGAAAAAGTCGCATGCTTAGAAGATAATGATGCCAGGCTTGCATTGGATCCACAAAACAGATACAGAATTCAGACAAAACCTCATGGACATGGTGACGTGCATTCGCTTCTTTATTCCAGCGGTATTCTGAGAGTATGGCATGATGCTGGGTTGAAATGGGTTCTCTTTTTTCAAGATACAAATGGACTTCTCTTTAAGGCAATTCCATCAGCACTGGGTGTCAGTGCTGCCAAACAGTACCATGTCAACTCTCTTGCAGTACCTCGGAAAGCAAAAGAAGCTATTGGTGGAATTACCAGACTCAGTCACACTGATGGGAGGTCTATGGTGATAAATGTGGAATACAATCAGCTAGATCCTCTCTTGAGAGCAAGTGGATACCCTGATGGTGATGTCAATTGTGAGACTGGCTACTCCCCATTTCCAGGAAACATCAACCAATTGATTTTAGAACTTGGTCCTTACATTGAAGAGCTCTCAAAAACAGGAGGTGCCATACAGGAGTTCGTTAACCCAAAATATAAAGATGCCAGCAAAACTTCATTTAAGTCCTCAACTCGACTTGAATGTATGATGCAAGACTATCCAAAAACATTGCCTCCATCTGCCAGGGTTGGATTCACGGTGATGGAAACATGGCTTGCTTATGCACCTGTGAAGAATAATGCTGAGGATGCTGCTAAGGTGCCAAAAGGAAACCCATACCATAGTGCAACCTCTGGAGAAATGGCCATCTATCGCGCAAACAGCCTTATTCTCAAGAAGATTGGTGTCCAAGTAGCAGATCCAGTATTGCAGGTTTTCAATGGGCAAGAGGTTGAAGTTTGGCCCCGTATCACATGGAAACCAAAATGGGGTCTGACTTTTTCGTTGATCAAGAGCAAAGTCAGTGGACATTGCTCCATTTCCCAGAGGTCTACACTGGCCATCAAAGGTCAACAAATTTCTATTGAAAATCTGTCCTTAGATGGGGCTCTTATTATTGATGCTGTTGATGGTGCACAGGTAAACGTGGGTGGTTCAGTTCAAAACAAAGGCTGGACCCTTGAAACTGTTGACTACAAAGATGCTTCAGAGCCTGAGGTATTGAGAATCAGGGGTTTTAAATTTAACAAAGTTGATCAGCTGGAAGCAAAATACTCTGAACCTGGCAAATTTAACTTAAAGGCTTGA 1812 0.4415 MASSLGDNYKLLSPQQQELVKVLLDNGQGHLFRDWPGPGVDDDEKKAFFDQLIRLNSSYPGGLEAYIKNAKRLLADSKAGKNPFDGFTPSVPTGETLTFGDENFIKFEETGVREARKAAFVLVAGGLGERLGYSGIKVALPAETTTGTCFLQHYIESILALQEASSQELSGECQTKIPLVIMTSDDTHGRTLELLESNSYFGMQPTQVTLLKQEKVACLEDNDARLALDPQNRYRIQTKPHGHGDVHSLLYSSGILRVWHDAGLKWVLFFQDTNGLLFKAIPSALGVSAAKQYHVNSLAVPRKAKEAIGGITRLSHTDGRSMVINVEYNQLDPLLRASGYPDGDVNCETGYSPFPGNINQLILELGPYIEELSKTGGAIQEFVNPKYKDASKTSFKSSTRLECMMQDYPKTLPPSARVGFTVMETWLAYAPVKNNAEDAAKVPKGNPYHSATSGEMAIYRANSLILKKIGVQVADPVLQVFNGQEVEVWPRITWKPKWGLTFSLIKSKVSGHCSISQRSTLAIKGQQISIENLSLDGALIIDAVDGAQVNVGGSVQNKGWTLETVDYKDASEPEVLRIRGFKFNKVDQLEAKYSEPGKFNLKA. 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g02391 603 FunFam UDP-sugar pyrophosphorylase 471 591 - -
Seca4g02391 603 CDD UGGPase 118 435 - -
Seca4g02391 603 Gene3D - 471 591 - -
Seca4g02391 603 FunFam UDP-sugar pyrophosphorylase 13 470 - -
Seca4g02391 603 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 13 470 IPR029044 -
Seca4g02391 603 PANTHER UDP- GLUCOSE PYROPHOSPHORYLASE 9 577 IPR039741 -
Seca4g02391 603 Pfam UTP--glucose-1-phosphate uridylyltransferase 111 267 IPR002618 GO:0070569
Seca4g02391 603 SUPERFAMILY Nucleotide-diphospho-sugar transferases 17 543 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g02391 Seca-Chr4 40676432 40688357 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g02391 K12447 - gmx:778158 1105.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g02391 4 40676432 40688357 Seca4g02391 4 40676432 40688357 ECH