Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g02390 ATGGCCACAAGTTGCTCCTACATGGTTTCCACCAAGTTATCCATGGTAGGTTGGACTGGAGGAAGAAATGAAATGAGAAACAGGAGAGCCTTTTTCATTTCAGCTCAACAACAACAACAAACTGATGTTCAGGAAGCAGAGAGGGACAAGGCTCAAGAAGAGCAACAACAATTAGGAAGTCAGACAGTGAAGCCAAAGGAAAGAACAAAACCAAGGCCAGTGGAACCTCAGATCAATGTCAAAAGCAAAAACATGAGCAGGGAATATGGTGGACAGTGGCTCAGCTGTGCCACACGCCATGTCAGGATCTATGCAGCTTATATTGACCCTGAAACTTGTGAGTTTGATCAAACCCAGATGGATAAGCTCACCCTTATTCTTGATCCTACTGATGAGTTTGTGTGGAATCCTGAGACCTGTGAAATGGTTTATTCTTACTTCCAAGAGCTTGTGGATCACTATGAGGGTGCTCCATTGACAGAATACACACTTCGCCTGATTGGTTCAGACATAGAGCACTATATAAGAAAGCTGTTGTATGATGGGCAAATAAAGTATAATATGAATGCAAGGGTTCTGAATTTCAGCATGGGCAAGCCACGGATCATGCTCAACAATGATTTCCAACCTGAAGATACACCTGCAAAATAG 651 0.4301 MATSCSYMVSTKLSMVGWTGGRNEMRNRRAFFISAQQQQQTDVQEAERDKAQEEQQQLGSQTVKPKERTKPRPVEPQINVKSKNMSREYGGQWLSCATRHVRIYAAYIDPETCEFDQTQMDKLTLILDPTDEFVWNPETCEMVYSYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKLLYDGQIKYNMNARVLNFSMGKPRIMLNNDFQPEDTPAK. 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g02390 216 Coils Coil 34 56 - -
Seca4g02390 216 PANTHER NAD(P)H-QUINONE OXIDOREDUCTASE SUBUNIT M, CHLOROPLASTIC 1 212 IPR018922 GO:0016655
Seca4g02390 216 MobiDBLite consensus disorder prediction 36 76 - -
Seca4g02390 216 Pfam Cyanobacterial and plastid NDH-1 subunit M 94 202 IPR018922 GO:0016655
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g02390 Seca-Chr4 40647844 40650194 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g02390 - - gmx:100527195 357.451
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g02390 4 40647844 40650194 Seca4g02390 4 40647844 40650194 ECH