Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g02381 ATGAAACTGAAGTCACTATCACTGAAGTCCCCATTGGATTGCATTGCAATCCAGTTTTTTTTTTATTATTATTATTTCGGGGTGGATAGGACCCGATCCATACATACATACTACCCGACCCGGTTTCCTTTTCTCTCACTGACGTTTTCTCGGAAAAGAAAGAGCAGGAAAATTTTCACAACCAAACTCGAATTGCAGTTAAAACCTCCAGGCCCAGAGAGAAGAGTCGATTTATTCAAATTTTTTTATTATATTAATGTCTTTCTATTTTCGTTAATTAATTATGGAATCCCGCGCAATCTGTCACGAAGCAAGAAATTCCCTTGTTCGCTGTTTAGGGCTCACACTTTAGTTTCTCCAATCCCTAATTCTCGAATCATGGCGGAGGAGAAGAGGGCTTCGTCGTCGTTCGTGAAGAAAGGCGACCGACAAATCTTCACGGTGGAGCTCCGGCCGGGAGAGACCACCATTGTTTCATGGAAGAAGCTCATGAAAGACGCTAACAGCAAGCCTAACGGATCCACTTCGGCCTCTCAACAACCCACAATCGCTCCGGGACAACCTGTTGAGATTGAAGAAAAAGATGCTTCTCAACCAAACCGTTTCAGTGCTGTAATAGAGAAGATTGAACGCCTTTACATGGGTAAGGATAGTAGTGATGATGAAGATCTGCTTGATGTTCCTGATGATGATCAGTATGATACCGAAGACTCTTTTATAGATGATGCTGAGTTGGATGAATATTTTGAGGTCGATAATTCTGCAATCAAACATGATGGGTTCTTTGTAAATCGGGGGAAATTGGAACGCGTAAATGAACCTCCTGTATTACCTAACCAACAACCAAAGAAAAGGCGCCGAAAAGATAATGATGATGGATCAAATAAACACGTAAAAGTGGGCAAGCCAGCATCTGGAAAAACATCACTACAAGCAAAGAATGTATGTAATTCCTCAGAAAATTTGGTTGCACCTGGTGAACATTATGAAGACTTGAAGCTTCGGAATCAATTGGATGTCACTGGAATTAGTTCAAAAAAGAAAACTGCTGATATCAAACCAACATTGGACCCTTCTGTCTCTTTGAAGGCATCGAGTGATGTTGTTCCTGCTTCTGTGACAGAAGCAAAAGATGCTGATAAGCAGAAGATAGGAGCTTTTAAATCTAAGAACCCAAGTGATAAATATAAAGATTCAAGTGGATCATTTGATGCATCACATCAGAAGTACCATGAAAAAGGTGCTTACACGCATTCCAAAGTTGGACCCCAACCTGGAAGACCATCAAGTAATATTGATGATTTGGAAAGTATCAGTCGATCAAAAGAAAAAAATGGCATGCGTGAACTGCCAGATCTTAACTTGTCTGAGGGAAAATCTGCTACACAAGCAATAAAATCTGAATACGGGCTCAAGAAAGATGGTCCTAGTGTTAGGCCAAAAACTTCAATGCTTGAAAAGGCTATTCGTGAGTTAGAGAAAATGGTTGCAGAATCAAGACCACCTGCAGTGGAAAACCAGGAGGCTGATAATACACCCCAGGCAGTCAAAAGGAGGTTGCCCAGAGAAGTAAAGCTAAAGCTTGCTAAAGTTGCTAGACTAGCAGCAAGCCAAGGGAAAGTATCAAAAGAGTTAATTAACCGTCTTATGAGTATTCTTGGGCACTTGATTCAGCTTAGAACATTAAAGAGAAACTTAAAAATAATGATCAGTATGGGTCTGTCAGCAAAGCAGGAGGAGGATGATAGGTTTCAACAAATTAAAAAGGAAGTTGTTGATATGATCAAGATGCAGGCCCCAACTCTGGACTCCAAGCAACAGCAGAAAGCTGGAGCATCTGGTGATTTGCAAGAATTTGGTCCTGATGGAAAAGCAATAACTAAAAGGAAGTTTACTATGGACACTGCATTGGAGGACAAGATTTGTGATCTCTATGACCTTTTTGTTGATGGGTTGGATGAAAATGCAGGTCCTCAAATCAGAAAGTTGTATGCTGAGGTGGTTCAAATTCTCTAA 2016 0.4067 MKLKSLSLKSPLDCIAIQFFFYYYYFGVDRTRSIHTYYPTRFPFLSLTFSRKRKSRKIFTTKLELQLKPPGPERRVDLFKFFYYINVFLFSLINYGIPRNLSRSKKFPCSLFRAHTLVSPIPNSRIMAEEKRASSSFVKKGDRQIFTVELRPGETTIVSWKKLMKDANSKPNGSTSASQQPTIAPGQPVEIEEKDASQPNRFSAVIEKIERLYMGKDSSDDEDLLDVPDDDQYDTEDSFIDDAELDEYFEVDNSAIKHDGFFVNRGKLERVNEPPVLPNQQPKKRRRKDNDDGSNKHVKVGKPASGKTSLQAKNVCNSSENLVAPGEHYEDLKLRNQLDVTGISSKKKTADIKPTLDPSVSLKASSDVVPASVTEAKDADKQKIGAFKSKNPSDKYKDSSGSFDASHQKYHEKGAYTHSKVGPQPGRPSSNIDDLESISRSKEKNGMRELPDLNLSEGKSATQAIKSEYGLKKDGPSVRPKTSMLEKAIRELEKMVAESRPPAVENQEADNTPQAVKRRLPREVKLKLAKVARLAASQGKVSKELINRLMSILGHLIQLRTLKRNLKIMISMGLSAKQEEDDRFQQIKKEVVDMIKMQAPTLDSKQQQKAGASGDLQEFGPDGKAITKRKFTMDTALEDKICDLYDLFVDGLDENAGPQIRKLYAEVVQIL. 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g02381 671 MobiDBLite consensus disorder prediction 272 309 - -
Seca4g02381 671 PANTHER CAPZ-INTERACTING PROTEIN AND RELATED PROTEINS 133 666 - -
Seca4g02381 671 MobiDBLite consensus disorder prediction 222 236 - -
Seca4g02381 671 MobiDBLite consensus disorder prediction 347 458 - -
Seca4g02381 671 MobiDBLite consensus disorder prediction 280 298 - -
Seca4g02381 671 Pfam HPC2 and ubinuclein domain 227 269 IPR014840 -
Seca4g02381 671 MobiDBLite consensus disorder prediction 217 236 - -
Seca4g02381 671 MobiDBLite consensus disorder prediction 374 416 - -
Seca4g02381 671 MobiDBLite consensus disorder prediction 436 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g02381 Seca-Chr4 40434329 40441648 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g02381 - - gmx:100793966 855.899
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g02381 4 40434329 40441648 Seca4g02381 4 40434329 40441648 ECH
Seca4g02381 4 40434329 40441648 Seca4g02381 4 40434329 40441648 PCT