Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g02378 ATGTTGATGTTGGCATGTAGTCTGTGCACATACCACATGACTTTCTCCGTCACCTCGGGCAATGCCAGAATCTTGGCTTTCCGCTTCGAATTGCAGAGAAAGGCTCATCCCCGGAGGAGAACACACTTCGTCACCGCCCAACTTTCCAACTCCTTTTCCTTAAATTTCGGATTGGATTCTCAGAGCTTGAAGTCTATTCAATCCCATGATCCATCACGGTTATCATGGATGGGACCAGTTCCTGGTGATATTGCTGAAGTGGAGGCATATTGTAGGATCTTTAGGAATTATGAAAGGCTTCATTCTGCATTAATGGATGCATTGTGTAACCCATTCACTGGTGAATGTAGTGTTTCACTTTCATATGAGGTTCCATTTGATGAGAAACCACTTCTAGAAGATAAAATAGTTTCTGTCCTGGGATGCATGGTTGCCCTTGTGAACAATGGGAGGGAGGATGTTCTTTCTGGAAGATCTTCCATTATGACTCCCTTCGCTGCTGCTGGGGTTAGCACAATAGAGGAAAACCTCCCCCCACTTGCCGTTTTCAGGAGCGAGATGAAAAGGTGTTGTGAGAGCTTGCATGTTGCTCTTGAGAACTATTTAATTCCTGGTGATGATAGAAGCTTGGATGTGTGGAGGAAACTTCAAAGACTGAAGAATGTCTGCTATGATTCCGGTTTTCCTCGCGGGGAGGATTATCCATGTCCTGCATTATTTGCAAACTGGAGTCCTGTATATTTATCCACTTCCAAAGAGGATGCAGAGTCCAAAGAATCTGAACCAGCTTTTTGGATAGGCGGGCAGGTAACAGAAGAAGGGCTAAAGTGGTTGCTGGATAAAGGTTGTAAAACTATAGTAGATCTTAGAGAAGAGACTGTAAGAGATAACTTCTATCAAGCAGCTGTGCATGATGCTATTTCATCTGGAAGTATTGAATTGGTCAAAATCCCCGTTGAAGTTAGGACTGCGCCTACAATGGAACAAGTTGAGAGGTTTGCATCTTATGTTTCAGATTGCAGCAAAAGGCCAATATATCTTCACGGAAAGGAAGGAGTTTGGAGAACATCTGCCATGGTCTCCAGATGGAAGCAGTACATGACTCGCTCTACATTACATTATGTTTCTAATCAAGCAGTTATTGCTGATGACATGTTATCAGATAATACAAATGGATATGGGAAACTGCAGGACTCAATGATTGCTGAGAGATCCTCCCTGGAAAAAGATACTAATTTGTTGCAAGAGAGTTTGGGTGCAACACAGAGTTCTATTGACTCATTTGACCAAAGTAACTTTCCAAAGGAGAATAGTGAAAAAACACAAAGTAATGAGGCCTTAAGTGGAATTTTTCCTAATGATAGGACTTCATCACGAGCTACTGCTGTTGATGGGGAAGTATCTTGTCCAAGTTTCTTCAGCAAAACTAGCCCTTTAGAAGCTCAAGTTCCTCCTCATGATGTCTTTTCCAAAAAAGAGATGTCTAGATTTTTGGGAAGTAGGAAGATCTCAAAACCTTCTTATTTCAGTTATCAGGTTAATAGGCTGGACTGCTTGCCAGATTCAAGGAACATGAATAGTAGAAGGCTCCATGGGGGAGTGATGATCAGCAGTGGTACTAATCCTGAACCTAAAATTGTGGGTCCAGCAGAAAGTTCCAATGGGTCAGCTCATGTGGATTATCAATCTGGAGAGCCCCGGATTACAGTTGGTAGTAAGTGGAAGTTAGTGAATGTGAATACTTCCAGTTCTTTTATGACAACGGTTAATGGGTTTAGTGAAAGGGAAATGTATCACATGACTAACACCAATGACATTGATAATGTCACAACTAACTCTCAAAGGATTGGAGATGATGATAATAAGGCGAGGGAAGACTTGGGATTCTTTGAAGGAGACATGTGTTCATCTTCAACGGGAGTTGTAAGGGTGCAGTCAAGAAAGAAAGCAGAGATGTTCCTTGTACGAACAGATGGATTTTCTTGTGTGAGAGAAAAAGTGACTGAATCTTCTTTGGCCTTCACTCATCCTAGCACCCAGCAACAGATGCTGATGTGGAAATCTACACCAAAGACTGCGTTGTTGCTGAAAAAGCCGGGGGAACAACTCATGGAGGAAGCTAAAGAGGTTGCTTCTTTTCTATATTACCAAGAGAAGATGAATGTTTTTGTGGAACCTGATGTGCACGATATATTTGCAAGAATTCCTGGGTTTGGATTTGTTCAGACCTTCTATAGTCAAGATACGCGTGATCTACATGAGAATGTAGATTTTGTGGCATGTTTGGGGGGAGATGGTGTTATACTGCATGCTTCAAATCTATTCAGAGGAGCTGTTCCCCCTGTTGTGTCATTTAACCTTGGATCACTTGGTTTTCTGACTTCTCACAGTTTTGAAGACTACAAGCAGGACTTACGACAAGTCATCCATGGAAATAATACACGAGATGGTGTGTACATTACTCTCAGAATGCGTCTCCGATGTGAAATTTATCGTAAGGGTAAAGCTATGCCAGGGAAAATATTTGATGTTCTCAATGAAGTTGTTGTTGATCGGGGTTCTAATCCATACCTTTCAAAGATTGAATGTTATGAACATGATAGACTTATAACCAAAGTACAAGGTGATGGAGTCATTGTGGCCACCCCTACCGGAAGCACCGCCTATTCTACTGCTGCTGGAGGTTCCATGGTCCATCCAAACGTTCCTTGCATGCTGTTTACCCCAATATGTCCACATTCACTCTCATTTAGACCAGTTATACTTCCGGATTCTGCGCAACTTGAATTAAAGATTCCAGAGGATGCAAGAAGCAATGCCTGGGTTTCATTTGATGGAAAGAGAAGGCAGCAACTTTCAAGAGGAGATTCTGTACGAATTTCTATGAGTCCACATCCGCTTCCAACTGTTAACAAGTTTGACCAAACAGGTGATTGGTTTCATAGCTTGATCCGTTGCCTAAATTGGAATGAAAGGCTTGATCAAAAGGCCCTATAA 2997 0.4204 MLMLACSLCTYHMTFSVTSGNARILAFRFELQRKAHPRRRTHFVTAQLSNSFSLNFGLDSQSLKSIQSHDPSRLSWMGPVPGDIAEVEAYCRIFRNYERLHSALMDALCNPFTGECSVSLSYEVPFDEKPLLEDKIVSVLGCMVALVNNGREDVLSGRSSIMTPFAAAGVSTIEENLPPLAVFRSEMKRCCESLHVALENYLIPGDDRSLDVWRKLQRLKNVCYDSGFPRGEDYPCPALFANWSPVYLSTSKEDAESKESEPAFWIGGQVTEEGLKWLLDKGCKTIVDLREETVRDNFYQAAVHDAISSGSIELVKIPVEVRTAPTMEQVERFASYVSDCSKRPIYLHGKEGVWRTSAMVSRWKQYMTRSTLHYVSNQAVIADDMLSDNTNGYGKLQDSMIAERSSLEKDTNLLQESLGATQSSIDSFDQSNFPKENSEKTQSNEALSGIFPNDRTSSRATAVDGEVSCPSFFSKTSPLEAQVPPHDVFSKKEMSRFLGSRKISKPSYFSYQVNRLDCLPDSRNMNSRRLHGGVMISSGTNPEPKIVGPAESSNGSAHVDYQSGEPRITVGSKWKLVNVNTSSSFMTTVNGFSEREMYHMTNTNDIDNVTTNSQRIGDDDNKAREDLGFFEGDMCSSSTGVVRVQSRKKAEMFLVRTDGFSCVREKVTESSLAFTHPSTQQQMLMWKSTPKTALLLKKPGEQLMEEAKEVASFLYYQEKMNVFVEPDVHDIFARIPGFGFVQTFYSQDTRDLHENVDFVACLGGDGVILHASNLFRGAVPPVVSFNLGSLGFLTSHSFEDYKQDLRQVIHGNNTRDGVYITLRMRLRCEIYRKGKAMPGKIFDVLNEVVVDRGSNPYLSKIECYEHDRLITKVQGDGVIVATPTGSTAYSTAAGGSMVHPNVPCMLFTPICPHSLSFRPVILPDSAQLELKIPEDARSNAWVSFDGKRRQQLSRGDSVRISMSPHPLPTVNKFDQTGDWFHSLIRCLNWNERLDQKAL. 999
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g02378 998 FunFam NAD kinase 2, chloroplastic 825 965 - -
Seca4g02378 998 FunFam NAD kinase 2, chloroplastic 680 846 - -
Seca4g02378 998 FunFam NAD kinase 2 chloroplastic 256 390 - -
Seca4g02378 998 Pfam ATP-NAD kinase N-terminal domain 693 811 IPR002504 GO:0003951|GO:0006741
Seca4g02378 998 Gene3D - 680 990 IPR017438 -
Seca4g02378 998 Hamap NAD kinase [nadK]. 690 989 IPR002504 GO:0003951|GO:0006741
Seca4g02378 998 Gene3D Protein tyrosine phosphatase superfamily 253 388 IPR029021 -
Seca4g02378 998 MobiDBLite consensus disorder prediction 425 456 - -
Seca4g02378 998 Pfam ATP-NAD kinase C-terminal domain 845 971 - -
Seca4g02378 998 PANTHER NAD KINASE 279 998 - -
Seca4g02378 998 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 262 364 IPR029021 -
Seca4g02378 998 Gene3D - 825 965 IPR017437 GO:0003951|GO:0019674
Seca4g02378 998 SUPERFAMILY NAD kinase/diacylglycerol kinase-like 693 993 IPR016064 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g02378 Seca-Chr4 40392861 40398479 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g02378 K00858 - gmx:100796381 1576.99