Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g02363 ATGAAAGCTCGCCTCTTACCTTTTCTATGGATAGCGTTACTGTTACCGTTAAGTTGGGCAGCTGAGGAGGAGGAGGCTTCCACAAGTATCATCTTCACCACACTTGGCAGAGCTTTCTATGCCTTCGACATCTATTCCCTCCCAATTCACCACCAACCACCCACCCCTGACCAAGAACTACGACTCACCGACGGCCGCTCCGTTAATTTCAACGGCCACTTCCTTTCTAATAACACCGCCAACCAACTCCCAACCAACTCCCCTCCCTTGCAACTCGTTTACATCACCGAGAGAAACGGCTTCCCCACCATATACTACGACGCCGTTTACACCACAACAAGCACACGAAGCAGAAGGAGATCAGCTCTTGAATCTGTCATCACAGATAGAATCCAAGTCCCTCTGTTACCTAATCAGCTCAAAGACAATAAAGTTTCCATCAAAGACAAGCCCAGTGTGAGTGCCGATGGTGAATACTTGGTCTACGTGTCCACCCACGAGGACCCGGGTGTTCCACGGGCAAGTTGGGCCGCGGTTTACTCCACCCACCTCCCATCGGGTCAAACCCGAAGACTCACCCCATACGGTGTCGCTGATTTCAGCCCCACCCTCTCTCCGTCCGGCGTCTGGACAGCTGTCGCTTCCTATGGTGCCGCCGGTTGGTCCGGGGAGGTAGAGGAGCTCTCTACGGACATCTACGTTTTCTTGACTCGGGACGGAACTCAGCGAATCAAGGTGGTTGAGCACGGTGGCTGGCCTTGTTGGGTAGACGATCGCACTCTTTACTTTCACCGGAGAGGTCACGACCAGTGGTGGAGCATTTACAGAGCGATTCTCCCCGCCGATTCCGCTGACTCGGTGGTCATCGAACGAGTCACCCCACCGGGTCTCCACGTGTTCACACCCGCAACTTCGCCAGGCAACCATAAGTTCATCGCCGTCGCGACGAGAAGGCCGGACTCGAAATTCCGTCACATCGAGTTGTTCGACCTGGTGAAGAACGAGTTCAGAGAGTTAACTCGCTTCGTCTCGCCCCGGAGTCACCACCTCAACCCGTTCATCTCGCCCGATTCGGCCCGGGTCGGGTACCACAAGTGCAGAGGGGAACCAAATATAAAGAAAAACGATAGTCCCCAGTTTTTGTTCGAGAATGTTCAGAGCCCAGTACCCGGTTTAACTCTTTTCCGGTTCATCGGTTCTTTTCCGGTTTTCTCACCCTCTGGCGACCAAATCGCTTACGTTGAGATGCCTGGGGTTTATGTAGTGAACCGGGACGGTTCAAACCTGCGCAAGGTTTCGGACGCCATGGCCTTTTCCACCGCATGGGATCCGGTTCGACCGGGTGTCATCTACACTGCCATAGGAGAAACATTTGCTCCGGAGAGCTCGAAGGTTGATATTGTATCCATCGACATTAACCAGAATAACCGGGTCAAGAGGTTAACAGTCGATGGGCAGAACAATGCTTTTCCGTCACTCTCGCCAGATGGAAAATGGATCGTGTTTCGATCGGGTCGGACGGGTCACAAGAACCTCTACGTGATGGATGCAGTTGGTGGAGAGAAAAAGAGTCTTAGAAGGTTGACTGACGGTCCATGGACAGACACCATGTGCAACTGGTCACCGGATGGGGAATGGATTGCTTTTGCATCAGACCGGCATGACCCGGGTACTGGGAGCTTCGAGATATACCTGATCCACCCGGATGGAACCGGGTTGAGGAAACTGATTCAAAGCGGGTCAGGTGGGAGGACTAACCACCCGTATTTTAGCCCCGATGGGAAGAGTATTGTGTTTACATCAGACTATGCTGCTATCTCAGCTGAACCAATTTCCAACCCGCATCACTACCAGCCATATGGTGAAATATTCACCATTCGTTTGGATGGTTCGGGGATGAAGAGATTGACCCATAATTCGTATGAGGATGGAACCCCTGCTTGGTCACCCAAGTATATGAAGCCCGTGAATGTTGAGAGGCCCAAGGGACCCTATTGCTCTTTTGAAGATTGTCATTGGCTCAACAACATACCAAATGGGACACTTGTGGATATCACTGCTTCGGCCAACACTTACTACACTAGACCTGAATCCAAGACTCGGTGTGGTCTGTAA 2115 0.5215 MKARLLPFLWIALLLPLSWAAEEEEASTSIIFTTLGRAFYAFDIYSLPIHHQPPTPDQELRLTDGRSVNFNGHFLSNNTANQLPTNSPPLQLVYITERNGFPTIYYDAVYTTTSTRSRRRSALESVITDRIQVPLLPNQLKDNKVSIKDKPSVSADGEYLVYVSTHEDPGVPRASWAAVYSTHLPSGQTRRLTPYGVADFSPTLSPSGVWTAVASYGAAGWSGEVEELSTDIYVFLTRDGTQRIKVVEHGGWPCWVDDRTLYFHRRGHDQWWSIYRAILPADSADSVVIERVTPPGLHVFTPATSPGNHKFIAVATRRPDSKFRHIELFDLVKNEFRELTRFVSPRSHHLNPFISPDSARVGYHKCRGEPNIKKNDSPQFLFENVQSPVPGLTLFRFIGSFPVFSPSGDQIAYVEMPGVYVVNRDGSNLRKVSDAMAFSTAWDPVRPGVIYTAIGETFAPESSKVDIVSIDINQNNRVKRLTVDGQNNAFPSLSPDGKWIVFRSGRTGHKNLYVMDAVGGEKKSLRRLTDGPWTDTMCNWSPDGEWIAFASDRHDPGTGSFEIYLIHPDGTGLRKLIQSGSGGRTNHPYFSPDGKSIVFTSDYAAISAEPISNPHHYQPYGEIFTIRLDGSGMKRLTHNSYEDGTPAWSPKYMKPVNVERPKGPYCSFEDCHWLNNIPNGTLVDITASANTYYTRPESKTRCGL. 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g02363 704 Gene3D - 558 682 IPR011042 -
Seca4g02363 704 Gene3D - 396 554 IPR011042 -
Seca4g02363 704 PANTHER DPP6 N-TERMINAL DOMAIN-LIKE PROTEIN 14 674 - -
Seca4g02363 704 Gene3D - 136 377 IPR011042 -
Seca4g02363 704 Pfam WD40-like Beta Propeller Repeat 525 564 IPR011659 -
Seca4g02363 704 Pfam WD40-like Beta Propeller Repeat 151 172 IPR011659 -
Seca4g02363 704 Pfam WD40-like Beta Propeller Repeat 633 650 IPR011659 -
Seca4g02363 704 Pfam WD40-like Beta Propeller Repeat 485 514 IPR011659 -
Seca4g02363 704 Pfam WD40-like Beta Propeller Repeat 585 602 IPR011659 -
Seca4g02363 704 SUPERFAMILY DPP6 N-terminal domain-like 151 435 - -
Seca4g02363 704 SUPERFAMILY Tricorn protease N-terminal domain 400 650 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g02363 Seca-Chr4 40193097 40195211 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g02363 - - aprc:113853220 1147.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g02363 4 40193097 40195211 Seca4g02363 4 40193097 40195211 ECH