Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g02337 ATGTTATTATTAGTTTCATGCACCTTTTTCTGTATGGTATATAAGCCGTTTATCTGTGCCAATAGGTATGCAAGTTCATTTTATGGTCCATTTAGAGAAGCACTGGACTCAAACCCCCAGTTTGGAGACAAGAAGACTTATCAGATGAACCCAGCAAATTACAGAGAGGCTCTGACTGAGATGCGGGAAGATGAAGCTGAAGGAGCTGATATTCTCTTGGTGAAGCCTGGTCTTCCATATTTGGATATCATTAGGCTGCTCAGGGATAATTCTCCTTTGCCAATTGCAGCATATCAGGTTTCTGGTGAATACTCAATGATAAAAGCTGGTGGTGCTCTGAAAATGATTGATGAAGAAAAGGTTATGATGGAGTCACTACTGTGCCTCCGACGGGCTGGTGCTGACATCATCCTTACATATTTTGCACTACAAGCTGCCAGATGTTTGTGTGGAGAGAAGAGGTGA 465 0.4237 MLLLVSCTFFCMVYKPFICANRYASSFYGPFREALDSNPQFGDKKTYQMNPANYREALTEMREDEAEGADILLVKPGLPYLDIIRLLRDNSPLPIAAYQVSGEYSMIKAGGALKMIDEEKVMMESLLCLRRAGADIILTYFALQAARCLCGEKR. 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g02337 154 PANTHER DELTA-AMINOLEVULINIC ACID DEHYDRATASE 21 151 IPR001731 GO:0004655|GO:0033014|GO:0046872
Seca4g02337 154 PRINTS Delta-aminolevulinic acid dehydratase signature 16 35 IPR001731 GO:0004655|GO:0033014|GO:0046872
Seca4g02337 154 PRINTS Delta-aminolevulinic acid dehydratase signature 68 84 IPR001731 GO:0004655|GO:0033014|GO:0046872
Seca4g02337 154 PRINTS Delta-aminolevulinic acid dehydratase signature 123 142 IPR001731 GO:0004655|GO:0033014|GO:0046872
Seca4g02337 154 PRINTS Delta-aminolevulinic acid dehydratase signature 93 108 IPR001731 GO:0004655|GO:0033014|GO:0046872
Seca4g02337 154 SUPERFAMILY Aldolase 20 150 - -
Seca4g02337 154 Gene3D Aldolase class I 17 154 IPR013785 -
Seca4g02337 154 ProSitePatterns Delta-aminolevulinic acid dehydratase active site. 68 80 IPR030656 -
Seca4g02337 154 Pfam Delta-aminolevulinic acid dehydratase 20 147 IPR001731 GO:0004655|GO:0033014|GO:0046872
Seca4g02337 154 SMART ALAD_2 1 149 IPR001731 GO:0004655|GO:0033014|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g02337 Seca-Chr4 39830114 39832255 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g02337 K01698 - pvu:PHAVU_009G1271000 256.529