Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g02333 ATGTTGTTCATCAACTTCACTGCTGAAGGTGCTGAATCTTTCAAATCAAAATACCGCGAAACTGCTGAGCAATTTAAACAACAGGAAATTAGCTTTCTGGTGGGAGATGTTGAAGCTAGTCAAGGTGCTTTCCAGTATTTTGGACTAAAGGAAGACCAAGTACCTCTAATTATTATACAACATAATGATGGGAAGAAATTTTTCAAACCCAATTTGGAACCCGATCACATTTCAACTTGGTTGAAGGCATACAAGGATGGAAATGTTGCACCATATGTTAAGTCTGAACCTATTCCTGAAGTTAACAATGAACCTGTTAAAGTGGTAGTTGGGGACAGTCTTCAGGACATAGTTTTCAACTCAGGGAAGAATGTTCTGCTGGAGTTTTATGCTCCTTGGTGTGGTCATTGCAAAAAGTTGGCTCCAATATTGGAGGAAGTTGCTGTCTCATATCAAAGTGATGACGGTGTTATTATTGCAAAACTGGATGCAACTGCCAACGACATACCAAGTGAAACCTTTGATGTCCAAGGATATCCAACTCTATACTTCAGGGCAGCAAGTGGAAAAATATCACAATATGATGGCAACAGGACCAAGGAAGACATCATAGAATTCATTGAAAAGAACCGGGATAAACCCTCTACACCTGCACAGGAGGAAAAAGGAAAAGATGAGCTTTGA 684 0.3977 MLFINFTAEGAESFKSKYRETAEQFKQQEISFLVGDVEASQGAFQYFGLKEDQVPLIIIQHNDGKKFFKPNLEPDHISTWLKAYKDGNVAPYVKSEPIPEVNNEPVKVVVGDSLQDIVFNSGKNVLLEFYAPWCGHCKKLAPILEEVAVSYQSDDGVIIAKLDATANDIPSETFDVQGYPTLYFRAASGKISQYDGNRTKEDIIEFIEKNRDKPSTPAQEEKGKDEL. 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g02333 227 PRINTS Thioredoxin family signature 175 186 - -
Seca4g02333 227 PRINTS Thioredoxin family signature 125 133 - -
Seca4g02333 227 PRINTS Thioredoxin family signature 133 142 - -
Seca4g02333 227 MobiDBLite consensus disorder prediction 206 227 - -
Seca4g02333 227 SUPERFAMILY Thioredoxin-like 3 103 IPR036249 -
Seca4g02333 227 ProSiteProfiles Thioredoxin domain profile. 84 212 IPR013766 -
Seca4g02333 227 Gene3D Glutaredoxin 1 100 - -
Seca4g02333 227 FunFam Protein disulfide-isomerase 1 100 - -
Seca4g02333 227 Gene3D Glutaredoxin 101 214 - -
Seca4g02333 227 PANTHER PROTEIN DISULFIDE ISOMERASE 12 226 - -
Seca4g02333 227 Pfam Thioredoxin 106 209 IPR013766 -
Seca4g02333 227 ProSitePatterns Thioredoxin family active site. 126 144 IPR017937 -
Seca4g02333 227 CDD PDI_b'_family 1 85 - -
Seca4g02333 227 CDD PDI_a_PDI_a'_C 105 207 - -
Seca4g02333 227 Pfam Thioredoxin-like domain 1 82 - -
Seca4g02333 227 NCBIfam protein disulfide-isomerase domain 110 210 IPR005788 GO:0003756
Seca4g02333 227 SUPERFAMILY Thioredoxin-like 73 212 IPR036249 -
Seca4g02333 227 FunFam Protein disulfide-isomerase 101 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g02333 Seca-Chr4 39760276 39762589 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g02333 K09580 - gmx:100170705 390.193