Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g02331 ATGGGCTGCGGGGGCTCCAAGGTGGAGGAGTTCCCTGTGGTGACTCTTTGTAGAGAGAGAAAACAGTTCCTGAAAGCCGCATCGGAGCAACGCTACGCTCTTGCCGCAGCCCACGTCGCTTACTTCCAATCCCTCAGAGACATCGGTGAAGCCCTTCGAAGATTCGCCGACCAAGACCTCTTCATCGCCACCGCTTCTCCTTCTTCCCCTGTTCTCACATTACCTTCTCACGAAGGTAAACCCAAGAAAAACAAAAACAACAACCAACTTTCCTCTTCTTCCCCTTCCATTTCCCACCATGATTCCCCTTCTCCTGAGGGCTCTCACTTGCACCTTTCCTCTGGATCCGAGTTCAGTTCCCCTTCTTCAGGTCACATTCACATTCATGAAACCTCTGAGCAGGACCAAGAAACAGAACCAGAGGTACCACCAACTTCTTCTTATTCTCCTCCTTATGGGTATCAACATTATCACCATCCTCAAGATTGGACCCAGCCTGGGGTCAACACTTATGCTTACTACATGAAGAGATCTGCGCCTCAAGGGAAATCGATCATCTATGAAGAGCCAGAGAGGCACGTGGCACAAACAGGGCAATGGTCTGATTCACCATACGGGTATGGGTACCCGGGTATGAACATGAACGGTGGTTTCTTTGGTTTTCCGGCGGGACCCTCGTCTTCTTCTCCACCGCCTCCTCCTCCTCCGGCGGCGCCACCTTCGCCGCCGAGAACCTCTACTTGGGATTTCCTTAACTTTTTCGACACCTACGATAACAACGGGAACGGGTACCCGGGTTATGGCTATTACGGGTTCGGGTCGAGCGCGAGTAGCCCCGATTCGAAGGAGGTGAGGGAGAGAGAAGGGATTCCCGAATTGGAAGACGAGACGGAGCAAGAACCGTTGAACTTGAAAGAGGTTAGTCAAGAGGAGAAGAAGAAAAAGAAGATGGGAGAGGAAAAGGTCGTGAAACAAAATGGTGGTGGTGGCAGAGATTTTGGGGAAGGAACTTCAAATACCAAGGCAGTGCCTTTGCAACAGGTTAGCAGCAGTGATGGAAGTTCCAAAACGGTGCGTTTTAGCAGCGATGGTGGTGGTAGTGGTGGTGGTTCTCTTTCTGCTCATGAAAAGGAGAGTCCTGATGCTGTTGCTAGTTCTAAAAGCTCTCCTGAAGAGCAGGCTCGGAAGAAAGGGGTGAGTTTTGAGATTGATCATGATGAAGCAACTGTTACTACTGTGGATGGTGAGTCTTCAGTGTTGAGTAGCATAACCACTTTGTCTCCACATGGCACTAGGGATATCAAAGAGGTTGTGCAGGAAATTAGAGATGAGTTTGAGACTGCTTCTAATTATGGGAAAGAGGTTGCATTGCTGCTTGAGGTTTGCAAACCTCCTTATCGGTCCAAGGTTGCTCCATTTAGAGTTATCTTTTCCAGGATCTTGCAGGTGGTAGCACCTTCCAGGTCAGCTGCGCATCCTCCATCTAAGCCACCAATACAATTTTCTTCTAGGACAATGAAATTGGCAAAATCATACTGTGGGGAACCTGGGAAAGACTCAAAGACAAATCCAGAAAACCTTTCATCTACATTGGAGAAACTTTATGCATGGGAAAAGAAATTATATAAGGAAGTTAAGGATGAAGAAAGGTTACGGGCTATTTATGAGAAACAATGCAAGAGACTGAAAGCACTGGATAGCCGAGGAGCTGAATCTAGTAAAATTGATGCTACTGAGGCATCAATAAAAAAGTTGCTAACAAAAATCAACATTTGCATCAGAACTGTTGAAACTATATCAGGGAGGATACATAAATTGAGGGATGATGAATTACAGCCTCAGCTTGCAGCATTGATTAATGGGTATCAAATTGCTTCACTTATTCACTATGCTAATATTTATCTGTTTATGCATGGTAATGTTTTTTATCAGAGATTTAAAATTCTGATAAGAGAATATACAGTCAAAGGGCATTTTCTTTGTTTTTATTTTATAGGGTGCAATTTGTTTGGTCACATCTCTTCTTCCCTTCTAAGGATTAGACAAATGGGTATTGATGTTTTTAAATTTCACAAGACACGGAACATTTGA 2091 0.4534 MGCGGSKVEEFPVVTLCRERKQFLKAASEQRYALAAAHVAYFQSLRDIGEALRRFADQDLFIATASPSSPVLTLPSHEGKPKKNKNNNQLSSSSPSISHHDSPSPEGSHLHLSSGSEFSSPSSGHIHIHETSEQDQETEPEVPPTSSYSPPYGYQHYHHPQDWTQPGVNTYAYYMKRSAPQGKSIIYEEPERHVAQTGQWSDSPYGYGYPGMNMNGGFFGFPAGPSSSSPPPPPPPAAPPSPPRTSTWDFLNFFDTYDNNGNGYPGYGYYGFGSSASSPDSKEVREREGIPELEDETEQEPLNLKEVSQEEKKKKKMGEEKVVKQNGGGGRDFGEGTSNTKAVPLQQVSSSDGSSKTVRFSSDGGGSGGGSLSAHEKESPDAVASSKSSPEEQARKKGVSFEIDHDEATVTTVDGESSVLSSITTLSPHGTRDIKEVVQEIRDEFETASNYGKEVALLLEVCKPPYRSKVAPFRVIFSRILQVVAPSRSAAHPPSKPPIQFSSRTMKLAKSYCGEPGKDSKTNPENLSSTLEKLYAWEKKLYKEVKDEERLRAIYEKQCKRLKALDSRGAESSKIDATEASIKKLLTKINICIRTVETISGRIHKLRDDELQPQLAALINGYQIASLIHYANIYLFMHGNVFYQRFKILIREYTVKGHFLCFYFIGCNLFGHISSSLLRIRQMGIDVFKFHKTRNI. 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g02331 696 MobiDBLite consensus disorder prediction 68 161 - -
Seca4g02331 696 MobiDBLite consensus disorder prediction 138 152 - -
Seca4g02331 696 MobiDBLite consensus disorder prediction 225 243 - -
Seca4g02331 696 Pfam Protein of unknown function (DUF632) 435 621 IPR006867 -
Seca4g02331 696 Pfam Protein of unknown function (DUF630) 1 59 IPR006868 -
Seca4g02331 696 MobiDBLite consensus disorder prediction 85 127 - -
Seca4g02331 696 PANTHER UNCHARACTERIZED 1 621 - -
Seca4g02331 696 MobiDBLite consensus disorder prediction 280 326 - -
Seca4g02331 696 MobiDBLite consensus disorder prediction 275 403 - -
Seca4g02331 696 MobiDBLite consensus disorder prediction 220 249 - -
Seca4g02331 696 Coils Coil 545 565 - -
Seca4g02331 696 MobiDBLite consensus disorder prediction 339 368 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g02331 Seca-Chr4 39732642 39738457 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g02331 235 656 Acyl Lipid Metabolism Gene Families AT2G27090 27.051 2.75e-23 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g02331 - - aprc:113852495 668.307