Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g02326 ATGGTGGACATTAACTGTGTGTCTGGCATAAACCCCATTCGTTGCCTTTGCAAAGCATACAAATCACTTATCAACAGATGGTTTCGTCGTCAGAAATCATTATCCTCAAGCGATGATAACACACCACGCCAGAACCAAACACAACGGGGGCAGGAACCTGTTTTAGATAATAGTAATAATAAAGAGGGTGCAGCCATGAATGGAGTTGACAGCTTCAGATTGAATGGCAATGATTTGAGAGATAATGATCTAATGCCTAGTTCAAGAGGGTGTTGTTTATATAGGCATAGAAGCTCAGACAATTCATGTTTTCCTTCCAAGTCTTCTCAATCTAGAAATGCAAGAAAAAAGATTAATCACACCCAAAGCAAAGGCAGGGAGAGCTATGATTTTATGCCTTCCCCTTCTTCATTGAATAGCAGTGGTAGTTTCAGATTGCCTCCTCATCTGCAATCAAGAAATGCCAGCCGTAGGATTAGCACTCCAATCATGTATTCTAATTCATCTGGGATGCTAAAACCCCCACCAATTGAGAGAAAACTTGAATGCACCCTTGAAGAGTTGTGCTATGGATGCAAGAAAAAGGTCAAGATCACAAGGGATGTCCTCACAGATACCGGGGGAATAGTTCAAGAGGAGGAACTGCTAACAATAAAAGTACAGCCAGGATGGAAGAGAGGAACAAAGATAACTTTTGAAGGAAAAGGGAATGAGAGACCTGGTGCATACAGAGAAGATATAATATTTATCATCTCTGAGAAAAGGCATCAATTATTTAGAAGAGAAGGGGATGACTTGGAATTGGGTGTTGAAATTCCCTTACTAAAGGCACTTACTGGCTGTAAAATATTAGTCCCACTATTAGGTGGAGAACAGATGCATTTGACAGTGGATGATATCATATGCCCTGGCTATGAGAAGATGATCCCTGGCCAAGGTATGCCAATCTCAGGACAAGGAGGGAAAAGAGGAAACTTAAGAATTACATTTTTAGTTGAGTTTCCAAAACAACTTACAGATAATCAAAGATCTGAGGTTGTTGGTATTTTACAGCATTCTTGTTGA 1065 0.4019 MVDINCVSGINPIRCLCKAYKSLINRWFRRQKSLSSSDDNTPRQNQTQRGQEPVLDNSNNKEGAAMNGVDSFRLNGNDLRDNDLMPSSRGCCLYRHRSSDNSCFPSKSSQSRNARKKINHTQSKGRESYDFMPSPSSLNSSGSFRLPPHLQSRNASRRISTPIMYSNSSGMLKPPPIERKLECTLEELCYGCKKKVKITRDVLTDTGGIVQEEELLTIKVQPGWKRGTKITFEGKGNERPGAYREDIIFIISEKRHQLFRREGDDLELGVEIPLLKALTGCKILVPLLGGEQMHLTVDDIICPGYEKMIPGQGMPISGQGGKRGNLRITFLVEFPKQLTDNQRSEVVGILQHSC. 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g02326 354 CDD DnaJ_C 175 338 - -
Seca4g02326 354 FunFam DnaJ subfamily B member 13 256 336 - -
Seca4g02326 354 Pfam DnaJ C terminal domain 177 335 IPR002939 -
Seca4g02326 354 MobiDBLite consensus disorder prediction 33 75 - -
Seca4g02326 354 FunFam Dnaj homolog subfamily b member 173 254 - -
Seca4g02326 354 SUPERFAMILY HSP40/DnaJ peptide-binding domain 176 256 IPR008971 GO:0006457|GO:0051082
Seca4g02326 354 SUPERFAMILY HSP40/DnaJ peptide-binding domain 259 344 IPR008971 GO:0006457|GO:0051082
Seca4g02326 354 MobiDBLite consensus disorder prediction 33 65 - -
Seca4g02326 354 Gene3D - 173 255 - -
Seca4g02326 354 Gene3D - 256 336 - -
Seca4g02326 354 MobiDBLite consensus disorder prediction 125 155 - -
Seca4g02326 354 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 16 350 - -
Seca4g02326 354 MobiDBLite consensus disorder prediction 98 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g02326 Seca-Chr4 39637602 39639711 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g02326 K09519 - gmx:100782604 461.07