Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g02310 ATGGGTGGTGGGAAGCGGAACAAGGTTGAGGCATTTTTCTTAGCCACTCTCATACTGTGGTTGGCTTCCGTTTGTTTCCAGATAGTCTTCAACAACCGCACGGAGCTTCTCTCCCTCATCGCTGGGTCCTTCTTTTACCAGACATCTAACTGCCTTATCCGATTCTTCTCCAAACTCAGAGATCCTCTCTTCGTTAACACCTCTGTTTCTCTTCTTCACGCCGCCGTCACCTCCTCTTCAGTGATCTTCATCTTGTCCAGACAGTGGTTAACTAATGGATCAAGTGGAATGTTTGACCACTCACAGTTGGTTGAAGGTACTTGGCCATGGGCATTTGAGGCATTGTGCTTTTCCTGTGGTTACTTTGCATATGATCAGTGGGATATGCTTCATTACCGCTTATATAGTGGTTGGATCCCTTCTATCCTTGTGCATCATCTGGTTCTCCTTATTTGCTTCACCCTTGCTTTGTATCGAAATGTCACCATCAACTACCTTATTCTCACTCTTATCTGTGAGCTGCATTCCATCTTCCTGCATGTGAGAAAAGTGAGACGCATGGCTGGTTTTCGCAATGCAAAGAGCATAATGGTTAAGTTAGAATGGTTTTTTAATTGGGTCACCTTCTTTGTGGCAAGGTTTGTTCCTCATATTCTCATCACAGCCAAACTAATCAAGGATGCTCACAAATTTGGAAAGGGTATGGAGCTACCGCTGGCTCTGTTTGGCATGGCTGGGATGAATTTGCTGAACATTGGTCTTGGCATTGATCTCTTTAAAGCTTTTAAGAGAGAGGGGAAGTCCCAACAGGCTAATCATCATCAACATCGTGAATGA 837 0.4444 MGGGKRNKVEAFFLATLILWLASVCFQIVFNNRTELLSLIAGSFFYQTSNCLIRFFSKLRDPLFVNTSVSLLHAAVTSSSVIFILSRQWLTNGSSGMFDHSQLVEGTWPWAFEALCFSCGYFAYDQWDMLHYRLYSGWIPSILVHHLVLLICFTLALYRNVTINYLILTLICELHSIFLHVRKVRRMAGFRNAKSIMVKLEWFFNWVTFFVARFVPHILITAKLIKDAHKFGKGMELPLALFGMAGMNLLNIGLGIDLFKAFKREGKSQQANHHQHRE. 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g02310 278 PANTHER CT120 PROTEIN 20 270 - -
Seca4g02310 278 Pfam TLC domain 64 252 IPR006634 GO:0016020
Seca4g02310 278 ProSiteProfiles TLC domain profile. 59 276 IPR006634 GO:0016020
Seca4g02310 278 SMART lag1_27 59 264 IPR006634 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g02310 Seca-Chr4 39312244 39315513 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g02310 - - gmx:100806828 478.018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g02310 4 39312244 39315513 Seca4g02310 4 39312244 39315513 ECH