Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g02305 ATGAACGCCTACATTGCAGGTTTAATGGTTCCCCTCCTCGTACTCCTGCTCCGGAACTCCAAGAGCCGGAAGCGCCGCGGTTTGCCGGCGGACGTCGGTGGCGATCCCGGTTTTGCTGTGAGGAACCACCGGTTCGGTTCAACGCTTAGTTCGGCGTGGGAGGGTGTGTCGACCCTCGCGGAGCTGTTTGAGCGTGCATGCAAGGAGCACGGGGAGAGGTTGTTGCTAGGGACCCGCGTGTTGATCGAGAGAGAGATCGAAACAGCACATGATGGAAGAACCTTCGAGAAGCTTCATTTGGGAGAGTACCAATGGCTCACGTATGGTAAAGTGTTTGAATCCGTCTCTTGTTTTTCCTCTGGTTTGGCGAGGCTTGGTCATGTAAGGGGAGAGCGTGTAGCGATCTTTGCTGAAACCAGGAAAGAATGGTTTATTGCACTTCAGGGTTGCTACAGGAGAAACGCTACAGTTGTGACTATATATGCTTCGTTGGGAGAGGAAGCTTTATGTCACTCGTTGAATGAGACAGAGGTTACAACTGTGATTTGTGGGCACAAAGAATTGAAATCACTTGTACATATTAGTGGACAACTTGACTCAGTGAAACGTGTGATATGCTTGGACAATGATATCCCATCTGATGCCTTGTCTGCTCATCATGGCTGGACAATCACTTCCTTTGCTGATGTTGAGAAGCTTGGCAGAGAAAATCCTATTGAGGCTGATTTACCCCTTCCAGCAGATGTGGCAGTTATAATGTACACAAGTGGAAGTACAGGATTGCCTAAGGGTGTGATGATGACACATGGCAATGTCTTAGCAACAGTCTCTGCTGTAATGACAACTGTTCCTAACCTTGGGATAAAGGATGTATATCTTGCATACTTACCAATGGCTCATATCCTTGAATTAGTAGCTGAGAATTTGATTGCAGCTGTTGGAGGTTGTATAGGATATGGATCTCCTTTGACTCTAACTGATACATCAAACAAGATAAAAAGGGGGAAAAGGGGGGATGCCACTGAGTTGATGCCAACCGTGATGGCAGCTGTACCAGCAATTCTTGATCGTGTACGTGATGGAGTGCTCAAGAAGGTAAATGCAAAGGGAGGATTATCAAAGAAATTGTTTCATTTAGCCTATTCACGAAGGTTGCAAGCAATTAATGGTAGCTGGTTTGGTGCTTGGGGCTTGGAGAAGGCTCTATGGCATTTTCTGGTGTTCAAAAAGGTCCAAGCGATTCTGGGTGGTCGTATCCGTTTTATACTGTCTGGTGGTGCTCCCCTTTCTGGTGATACCCAGAGATTCATCAATATTTGTCTTGGTGCTCCAATAGGTCAAGGTTATGGTCTTACAGAGACTTGTGCTGGTGGGACATTCTCTGATTTTGATGATATATCTGTTGGCCGTGTTGGACCACCTCTTCCTTGCTCATATATTAAGCTAATCGACTGGCCTGAAGGTGGATATTCAATTAATGACTCACCAATGCCTCGCGGTGAAATTGTAATTGGCGGTCCAAATGTCACTCTTGGGTACTTCAAAAATGAAGAAAAGACAAGGGAATCTTACAAGGTTGATGAAAGAGGAACAAGATGGTTCTACACCGGCGACATAGGAAAATTTCATCCAGACGGTTGCCTTGAGATCATTGATCGGAAAAAGGACATAGTTAAACTGCAGCATGGAGAATACGTGTCCTTGGGAAAGGTTGAGGCAGCTCTTCTTGGCAGCCCCTATGTGGACAACATTATGTTGCATGCTGATCCTTTTCATAGTTACTGTGTGGCACTTGTGGCAGTTTCTCATCCCGCATTAGAGAATTGGGCTTCAAAGCAAGGAATTGGTTATTCTGATATTTCAGAACTATGCAGGAAAGAAGAAACTGTGAAAGAGGTGCATGCATCACTTGTAAAGGAAGCAAAGAAGGCTCGTTTGGAAAAATTTGAGATTCCTGCAAAAATTACATTACTTTCTGACCCATGGACTCCTGAGTCTGGCCTAGTCACTGCAGCTCTTAAGATCAAGAGAGAGATCATTAGAAAGACTTTTCAAGAAGAGCTCTCAAAGTTATATGCCTGA 2082 0.452 MNAYIAGLMVPLLVLLLRNSKSRKRRGLPADVGGDPGFAVRNHRFGSTLSSAWEGVSTLAELFERACKEHGERLLLGTRVLIEREIETAHDGRTFEKLHLGEYQWLTYGKVFESVSCFSSGLARLGHVRGERVAIFAETRKEWFIALQGCYRRNATVVTIYASLGEEALCHSLNETEVTTVICGHKELKSLVHISGQLDSVKRVICLDNDIPSDALSAHHGWTITSFADVEKLGRENPIEADLPLPADVAVIMYTSGSTGLPKGVMMTHGNVLATVSAVMTTVPNLGIKDVYLAYLPMAHILELVAENLIAAVGGCIGYGSPLTLTDTSNKIKRGKRGDATELMPTVMAAVPAILDRVRDGVLKKVNAKGGLSKKLFHLAYSRRLQAINGSWFGAWGLEKALWHFLVFKKVQAILGGRIRFILSGGAPLSGDTQRFINICLGAPIGQGYGLTETCAGGTFSDFDDISVGRVGPPLPCSYIKLIDWPEGGYSINDSPMPRGEIVIGGPNVTLGYFKNEEKTRESYKVDERGTRWFYTGDIGKFHPDGCLEIIDRKKDIVKLQHGEYVSLGKVEAALLGSPYVDNIMLHADPFHSYCVALVAVSHPALENWASKQGIGYSDISELCRKEETVKEVHASLVKEAKKARLEKFEIPAKITLLSDPWTPESGLVTAALKIKREIIRKTFQEELSKLYA. 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g02305 693 ProSitePatterns Putative AMP-binding domain signature. 252 263 IPR020845 -
Seca4g02305 693 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 39 692 - -
Seca4g02305 693 Pfam AMP-binding enzyme 98 561 IPR000873 -
Seca4g02305 693 SUPERFAMILY Acetyl-CoA synthetase-like 56 692 - -
Seca4g02305 693 Gene3D - 49 553 IPR042099 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g02305 Seca-Chr4 39236596 39248566 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g02305 20 693 Acyl Lipid Metabolism Gene Families AT2G04350 63.811 0.0 912
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g02305 K01897 - gmx:100778889 1205.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g02305 4 39236596 39248566 Seca4g02305 4 39236596 39248566 ECH