Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g02298 ATGCCTTCCGCTCCTTCAAAACTCTATACAGATGACGTTAGCCTTCTCGTCGTAACACTAGACACCAATCCTTTCTTTTGGAGCACTTTTCCTTTCCCCTTTTCGGAGTTTCTCTCTCAAGTGCTCGCTTTTCTCAATTCAATCCTGCTCCTAGGTCAGCTTAACCAAGTCATCGTTATCGCCACCGGCTGCAATTCATGTGGCTACGTTTACGATTCCACTTCCGATACCAACCATGGTTCCACAACTGGTACAATGCCCGCGCTTTATTCCAATCTGCTACACAAGCTTGACGAATTTGTCGCCAAGGACCAACAATTAGCCTCAGCTCATGCACCGGGAACCGTTCCATCTTCACTCTTATCAGGGTCATTGTCCATGGCCCTCTGTTATATACAGAGAGCTTTTCGTTCAGGACCGATGCACCCTCAACCTCGGATTTTATGTTTGCAAGGATCTGCTGATGGACCAGAACAGTATGTGGCAATCATGAATGCAATATTCTCTGCGCAGCGTTCTACAGTTCCTATAGATTCTTGTTATATTGGTTCGAACAATTCTGCATTCCTTCAGCAGGCTTCATACATAACTGGTGGCATATATTACAAGCCTCCCCAATTGGATGGGCTTTTTCAATATCTTTCAGTAAGTAAGCTTGTATCTTAA 666 0.4474 MPSAPSKLYTDDVSLLVVTLDTNPFFWSTFPFPFSEFLSQVLAFLNSILLLGQLNQVIVIATGCNSCGYVYDSTSDTNHGSTTGTMPALYSNLLHKLDEFVAKDQQLASAHAPGTVPSSLLSGSLSMALCYIQRAFRSGPMHPQPRILCLQGSADGPEQYVAIMNAIFSAQRSTVPIDSCYIGSNNSAFLQQASYITGGIYYKPPQLDGLFQYLSVSKLVS. 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g02298 221 Gene3D von Willebrand factor, type A domain 10 218 IPR036465 -
Seca4g02298 221 PANTHER TRANSCRIPTION INITIATION FACTOR IIH TFIIH , POLYPEPTIDE 3-RELATED 10 216 IPR004600 GO:0000439|GO:0006289|GO:0006355
Seca4g02298 221 Pfam Transcription factor Tfb4 13 217 IPR004600 GO:0000439|GO:0006289|GO:0006355
Seca4g02298 221 FunFam RNA polymerase II transcription factor B subunit 4 10 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g02298 Seca-Chr4 39123523 39133226 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g02298 K03143 - gmx:100810574 394.815
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g02298 4 39123523 39133226 Seca4g02298 4 39123523 39133226 ECH