Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g02289 ATGGCAGAAGACAGTGAGAAGAAGAAGGATGATATAGAGTCCCAGATTGAAACTACTATGCGCTCTCTCGTCCCTCACTTCAAGGAACAGTCCGATTCTTTGACATTTGAGGGTGTCCGTAGATTGCTCGAGAAGGACTTGGGATTGGAGGAATATGCTTTGGATGTGCATAAGAGGTTTATCAAGCAATGTTTGGTCAAGTGCTTAGATGGGGTTGGTGATGATGATACCTCAAAGATATCAGGAGAGGAAGGGGAAAAACGTGCAAGTACACAGGAGACAGAAGGATCAAAAGAAGAATATCAATCAAAAGATGTAAAGGATCCTTGCCCTGAAGATGAGGAGAAAATGGAAGACTCTCCAGTATTAGGTCTTCTTAAAGAACAGAAAGGAGTTAAACTTGAAACCAAGGAAGCTAAAGACAATGGAAAAAAAATAGTTCCAAGTGAGACCCTAATTAAGAAAGCTGTTAGAAAAAGAGCTTCATATGTCAAAGCTAATGCAGAGAAAGTCACCATGGCTGGTCTTCGTCGACTGTTGGAGGAAGATCTTAAACTTGATAAATTTACTCTTGATCCCTATAAGAAGTTTATAAGTCAACAGCTCGATGAGTCTCTGTTAATTGTGAAGGCATTAGCTTCTTCTGAAGTTCCGGAACCTGCAAAGAATGCTAAGAAAATAGTTAAGAAGAAACCTGATACCAAAGTAACTAAAAAGGTCAGCAGAGAAGAGAACTCTGATACTTCAGGTAAGTCGAGTGATGAGGAAGAGAATCGAGAAGATGAAGTCAAACCTAAAAAAAAACTTGTTCCAAAAGGCAAGATGCAGACTTCTGTTGGACCCAGAAAGCGTAAAGGAGAGGAGATCAATTTATCTAGTAAGAAAAAGGTCAAGCCTGTTAAAGAAGCCTCAGAAGACAATAGTGATACAGAAGATAATGAAAACAACTCTGAAGATGATCAGTCCCATTCATCACCAGAGAAACCTACCAAGAAGAAAGAAGCTTCAGCTCCTGTGTATGGTAAACGCGTGGAGCACTTAAAATCTGTTATTAAAGCGTGTGGAATGAGCGTTCCTCCTGCTATTTATAAAAAGGTTAAGCAAGTACCTGAAAACAAACGGGAGGGGCAGCTAATTAAGGAGTTGGAGGAAATACTGTCTAGAGAAGGATTGTCTTCAAATCCATCTGAGAAGGAAATCAAGGAAGTGAAAAGGCAGAAGGCGAGAGCCAAAGAACTTGAGGGTATTGATTTAAGTAATATTGTAACAAGTTCACGTAGAAGGTCAACAACTAGTTTTGCGGCTCCTCCACCTCCAAAGCCCAAGGTTCCTGTTGAAACTAGTGGCAATGGTGCTAAAGATGGTGATAATGACAACGATGTTGAAGGCGATGATAATGAAGAGGATGAAGAAGATGAAGAAGAGGATAGTAGTGATGATGATGGAAGTCAGAGTGAAGAATTTAATGATGATGAAGAGGACAGTGATTGA 1491 0.4011 MAEDSEKKKDDIESQIETTMRSLVPHFKEQSDSLTFEGVRRLLEKDLGLEEYALDVHKRFIKQCLVKCLDGVGDDDTSKISGEEGEKRASTQETEGSKEEYQSKDVKDPCPEDEEKMEDSPVLGLLKEQKGVKLETKEAKDNGKKIVPSETLIKKAVRKRASYVKANAEKVTMAGLRRLLEEDLKLDKFTLDPYKKFISQQLDESLLIVKALASSEVPEPAKNAKKIVKKKPDTKVTKKVSREENSDTSGKSSDEEENREDEVKPKKKLVPKGKMQTSVGPRKRKGEEINLSSKKKVKPVKEASEDNSDTEDNENNSEDDQSHSSPEKPTKKKEASAPVYGKRVEHLKSVIKACGMSVPPAIYKKVKQVPENKREGQLIKELEEILSREGLSSNPSEKEIKEVKRQKARAKELEGIDLSNIVTSSRRRSTTSFAAPPPPKPKVPVETSGNGAKDGDNDNDVEGDDNEEDEEDEEEDSSDDDGSQSEEFNDDEEDSD. 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g02289 496 MobiDBLite consensus disorder prediction 458 496 - -
Seca4g02289 496 ProSiteProfiles DEK C-terminal (DEK-C) domain profile. 147 207 IPR014876 -
Seca4g02289 496 MobiDBLite consensus disorder prediction 215 341 - -
Seca4g02289 496 MobiDBLite consensus disorder prediction 394 414 - -
Seca4g02289 496 MobiDBLite consensus disorder prediction 317 341 - -
Seca4g02289 496 MobiDBLite consensus disorder prediction 1 21 - -
Seca4g02289 496 SMART CHZ_2 407 442 IPR019098 -
Seca4g02289 496 Coils Coil 300 320 - -
Seca4g02289 496 MobiDBLite consensus disorder prediction 280 306 - -
Seca4g02289 496 PANTHER HIRA-INTERACTING PROTEIN 3 1 495 IPR037647 -
Seca4g02289 496 MobiDBLite consensus disorder prediction 234 269 - -
Seca4g02289 496 MobiDBLite consensus disorder prediction 1 16 - -
Seca4g02289 496 MobiDBLite consensus disorder prediction 75 120 - -
Seca4g02289 496 MobiDBLite consensus disorder prediction 386 496 - -
Seca4g02289 496 Pfam Histone chaperone domain CHZ 409 440 IPR019098 -
Seca4g02289 496 MobiDBLite consensus disorder prediction 418 432 - -
Seca4g02289 496 Coils Coil 2 22 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g02289 Seca-Chr4 39023283 39028992 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g02289 11 443 EF-hand Containing Proteins AT1G44780 47.059 1.75e-100 308
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g02289 - - gmx:100784738 638.647
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g02289 4 39023283 39028992 Seca4g02289 4 39023283 39028992 ECH