Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g02275 ATGGCGAAGGACATCAACCTATGCTCTGGAACTCAGATGACTCTGCTCTTGTTGTTATGCTTCTTCACCACTCTTAACATCATCCCTCAAACTGAAGCCGTTTGGTTAACCATCCCCACTTCAGGAACTAAGTGCATGTCCGAGGAAATCCAGACACACGTCGTCGTTTTAGCCGATTACTATGTTGTAGCCGATGATGTTCAGGGTCACCCGCTTCGCACTGTTTCTGTCAAGGTGACATCTCCATATGGAAATAGTCTTCATCACAATGAAAATGTTACCCACGGCCAGTTTGCATTTACAACTACGGAGAGTGGGAACTATGTGGCGTGCTTTTGGATTGATAGTAAGCATCAAGAAGGTGCAGGAGACGTCACATTAAGCCTTGAATGGAAAACTGGAATCGCTGCCAAAGATTGGGACACCGTTGCTAAAAAAGAAAAGATAGAGGGTGTTGAACTTGAGCTAAGGAAGCTTGAAGGAGCTGTGGAAGCCATCCGTGATAATCTCATATATTTGAAGGACAGGGAAGCAGAGATGAGGGAAGTTAGTGAAAAAACGAATGCTAGAGTTGCGTGGTTCAGTATCATGGCTATTGGCGTATGCATTTTGGTTTCGGTGATGCAGCTGTGGTATCTGAAACGCTTCTTTCGGAAGAAGAAGCTCATATAG 672 0.4479 MAKDINLCSGTQMTLLLLLCFFTTLNIIPQTEAVWLTIPTSGTKCMSEEIQTHVVVLADYYVVADDVQGHPLRTVSVKVTSPYGNSLHHNENVTHGQFAFTTTESGNYVACFWIDSKHQEGAGDVTLSLEWKTGIAAKDWDTVAKKEKIEGVELELRKLEGAVEAIRDNLIYLKDREAEMREVSEKTNARVAWFSIMAIGVCILVSVMQLWYLKRFFRKKKLI. 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g02275 223 PANTHER TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN 14 220 IPR015720 -
Seca4g02275 223 ProSiteProfiles GOLD domain profile. 43 158 IPR009038 -
Seca4g02275 223 Coils Coil 149 169 - -
Seca4g02275 223 SMART EMP24_GP25L_2 33 218 IPR009038 -
Seca4g02275 223 Pfam emp24/gp25L/p24 family/GOLD 35 218 IPR009038 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g02275 Seca-Chr4 38778442 38780492 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g02275 K20352 - gmx:100500676 358.992
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g02275 4 38778442 38780492 Seca4g02275 4 38778442 38780492 ECH