Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g02273 ATGGGTCTCTCAAAGGAACACCTTCTTGCGCGGTTACAGGAGCTTCAGATTGAATTTTCCAAGTATGAGCATCCAGTTGTTTTGACTGTTGAGGCTCAGGCAAAATATGTTGGACATTTGGGGGGTGGGCTGAGTAAAAATTTATTTTTGAAGGCCCTGATTACTACCCTTTTAAAACAGGACAAGAAAAACAGGTTTTATGTTGTTTCTGCTTTAGCTGATACCAAAGTAGATCTCAAAGTGTTATCCCAGCGGCTTGGTTTGGGAAAAGGAGGTTTACGAATGGCACCTGAAGAGGCTTTAGGTGAAATACTTCAGGTGCCCTTGGGTTGTGTCACTCCATTTGCGCTAGTGAACGATTCAGCACGAGATGTTTCACTGTTATTGGATCAAGGATTCAAGACACGGGAGCATTGCTTTTTCCATCCACTGGTAAATGACATGTCCATATCTCTAAATGCTCGTGATCTTGACAAATTTCTCAAATCAATAGGAAGAGATCCCTCATATGTTGATTTGGAGGCCAATCCTGCGGTGGGGAAAGATCAACCCCCTGATCTAGCTGCACTAGTTCCATCTGGTTCAATAAGTTTACCTGATCAACCAGAAAAGCAATCATCTTCCCAAGTTCCTAAGGATGGAAGCCTTGTTCCTGTGGATAATAGGTCGAAGACAGTTTCAGGTAAAAATTTTGTTTATTACTTTGTTCAATGTGTTAATTCATTAGTTACACGGAAACAAGGGCTTTTTGTTTCAATTGTCTTCATTTTTACAATTTGGATAATATTCACAAAGAGGATTGTACACTTCTATCTTATTTTTTGTTTTCCTTTTAAAGGTGGCTAG 846 0.3995 MGLSKEHLLARLQELQIEFSKYEHPVVLTVEAQAKYVGHLGGGLSKNLFLKALITTLLKQDKKNRFYVVSALADTKVDLKVLSQRLGLGKGGLRMAPEEALGEILQVPLGCVTPFALVNDSARDVSLLLDQGFKTREHCFFHPLVNDMSISLNARDLDKFLKSIGRDPSYVDLEANPAVGKDQPPDLAALVPSGSISLPDQPEKQSSSQVPKDGSLVPVDNRSKTVSGKNFVYYFVQCVNSLVTRKQGLFVSIVFIFTIWIIFTKRIVHFYLIFCFPFKGG. 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g02273 281 PANTHER YBAK DOMAIN-CONTAINING PROTEIN 1 230 IPR040285 -
Seca4g02273 281 FunFam Putative prolyl-tRNA synthetase 1 178 - -
Seca4g02273 281 SUPERFAMILY YbaK/ProRS associated domain 4 173 IPR036754 GO:0002161
Seca4g02273 281 Pfam Aminoacyl-tRNA editing domain 24 160 IPR007214 GO:0002161
Seca4g02273 281 Gene3D - 2 180 IPR036754 GO:0002161
Seca4g02273 281 MobiDBLite consensus disorder prediction 198 220 - -
Seca4g02273 281 CDD PrdX_deacylase 5 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g02273 Seca-Chr4 38739055 38742870 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g02273 - - ahf:112764287 385.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g02273 4 38739055 38742870 Seca4g02273 4 38739055 38742870 ECH