Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g02269 ATGCAGCTCTATAATACATCCACCCATTTACTGTCCAGATTCATGCCTTCCTCCAAATTGTTAGGCTTTTCAAACCATTTCCACTGCCTCATCGCCTCCTCTTCCCTTCCAACCCCAAAGTCCCCATCTTTCATTGCTGCCACCATGTCCACTGTTTCCACTGACAATGACACCGCCACCAAGAAATCGCATCCTCCCCTGCAGATTGCAAAGCGCTTAGAGAAGTTCCAGACAACAATCTTCACCCAAATGAGTTTGCTTGCCATCAAACATGGAGCCATAAACCTTGGTCAGGGCTTTCCCAACTTTGATGGTCCAGAATTTGTAAAGGAAGCAGCAATTCAAGCAATCAGGGATGGGAAAAATCAGTATGCCAGGGGTTATGGAATTCCAGACCTGAACATTGCTGTTGCTGAGAGATTTAAGAAAGATACTGGACTAGTGGTAAACCCTGAAAAGGAAGTTACTGTTACAACTGGGTGCACAGAAGCAATTGCTGCCACCATATTAGGATTAATAAATCCTGGTGATGAGGTTATCGTGTTTGCTCCTTTTTATGATTCTTATGAAGCCACTTTATCCATGGCTGGTGCAAAAATAAAAAGTATCACTTTGCGCCCTCCAGATTTTGCTGTCCCGCTTGAAGAGTTGAAGTCCATCATCTCAAAGAATACCCGTGCCATTCTTATAAATACCCCTCACAATCCTACGGGAAAGATGTTCACTCGAGAGGAACTCAATTCCATTGCATCTCTTTGCATTGAGAATGACGTTCTGGTTTTCACTGATGAAGTTTATGATAAGTTGGCATTTGATATGGAGCACATTTCAATGGCTTCTTTGCCTGGAATGTTTGAAAGGACAGTGACGATGAACTCCTTGGGGAAGACATTCTCCTTAACAGGATGGAAGATTGGGTGGATCATAGCACCCCCACACTTAACATGGGGAGTGCGACAGGCTCATGCTTTCCTCACTTTCTCAACCTCCCAACCTATGCAGTGGGCTGCTACAGTAGCTCTTAGAGCACCAGATTCTTACTATGTTGAGCTAAAGAGGGATTATATGGCTAAGAGAGCTATTTTGGTTGAAGGATTGAAGGCCGTTGGCTTCAAAGTGTTCCCATCCAGTGGAACCTACTTTGTGGTTGTAGATCACACACCTTTTGGACTTGAAAATGATGTTGCATTTTGTGAATATCTGGTTAAGGAGGTGGGAGTGGTGGCAATCCCTACCAGTGTATTTTACTTGAATCCAGAAGAGGGAAAAAATCTAGTCAGATTTACTTTCTGCAAGGATGCGGAAACTCTTAGGGCCGCTGTTGAGAGGATGAAGGAGAAGCTTAGAAAATGA 1353 0.4383 MQLYNTSTHLLSRFMPSSKLLGFSNHFHCLIASSSLPTPKSPSFIAATMSTVSTDNDTATKKSHPPLQIAKRLEKFQTTIFTQMSLLAIKHGAINLGQGFPNFDGPEFVKEAAIQAIRDGKNQYARGYGIPDLNIAVAERFKKDTGLVVNPEKEVTVTTGCTEAIAATILGLINPGDEVIVFAPFYDSYEATLSMAGAKIKSITLRPPDFAVPLEELKSIISKNTRAILINTPHNPTGKMFTREELNSIASLCIENDVLVFTDEVYDKLAFDMEHISMASLPGMFERTVTMNSLGKTFSLTGWKIGWIIAPPHLTWGVRQAHAFLTFSTSQPMQWAATVALRAPDSYYVELKRDYMAKRAILVEGLKAVGFKVFPSSGTYFVVVDHTPFGLENDVAFCEYLVKEVGVVAIPTSVFYLNPEEGKNLVRFTFCKDAETLRAAVERMKEKLRK. 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g02269 450 Gene3D Aspartate Aminotransferase, domain 1 83 444 IPR015422 GO:0003824
Seca4g02269 450 PANTHER FI04487P 69 449 - -
Seca4g02269 450 Pfam Aminotransferase class I and II 94 443 IPR004839 GO:0009058|GO:0030170
Seca4g02269 450 Coils Coil 434 450 - -
Seca4g02269 450 CDD AAT_like 94 446 - -
Seca4g02269 450 SUPERFAMILY PLP-dependent transferases 68 449 IPR015424 -
Seca4g02269 450 Gene3D - 106 344 IPR015421 GO:0003824
Seca4g02269 450 FunFam Aminotransferase, class I/classII 106 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g02269 Seca-Chr4 38638460 38641298 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g02269 K23977 - gmx:100818968 793.112
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g02269 4 38638460 38641298 Seca4g02269 4 38638460 38641298 ECH