Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g02268 ATGAGTATGCTTGCCATAAAATATGGAGCTATAAATCTAGGTCAGGGCTTTCCCAGCTTTGATGGTCCAGAATTTGTAAAGGAAGCAGCAATTCAGGCAATCAGGGATGGGAAAAATCAGTATGCCAGGGGTTTTGGAATTCCAGATTTGAACATAGCCATTGCTGAGAGATTTAAGAAAGATACTGGACTAGTGGTAGACCCTGACAAGGAAGTTACTGTTACAACTGGATGCACAGAAGCAATTGGTGCAACTATATTAGGATTAATTAATCCTGGTGATGAGGTTATTCTGTTTGCTCCTTTTTATGATTCTTACAATGCCACTTTATCCATGGCTGGTGCAACAATAAAAACCATCACTTTGCGCCCTCCAGATTTTGCTGTCCCTATTGAAGAGTTGAAGTCCACCATCTCAAAGAATACCCGTGCCATTCTTATAAATACCCCTCACAACCCTACAGGAAAAATGTTCACTCGAGAGGAGCTCAATTCCATTGCATCTCTTTGCATTGAGAATGATGTTCTGGTTTTAACTGATGAAGTTTATCATAAGTTGACATTTGATATGGAGCACATTTCAATTGCTTCTTTACCTGGAATGTTTGAAAGGACAGTGACAATGAATTCTTTGGGGAAGACATTCTCCTTAACAGGATGGAAGATTGGGTGGGCCATAGCACCCCCACACTTAACATGGGGACTGCGACAGGCGCACACTTTCATCACTTTCTCAACCTCCCATCCTTTTCAGTGTGGTGCTGCAGTAGCTCTTAGAGCACCAGATTCTTACTTTATTGAGCTCAAGAGGGATTACATGGTAAAGAGAGCTATTTTGATGGAAGGATCGAAGGCTATTGGCTTCAAGGTGTTCCCATCCAGTGGAACCTTCTTTGTGTTGGTAGATCACACCCCTTTTGGATTCGAAAATGATGTTGCATTTTGTGAATATCTAATTAAGGAGGTGGGAGTGGCAGCAATCCCTTCCAGTGTATTTTACTTGAACCCAGAAGAGGGAAAGAATCTAGTCAGATTCACTTTCTGCAAAGATGAGGAAACTCTTAGGGCTGCTGTTGAGAGGATGAAGGAGAAGCTTAGAAAATGA 1104 0.4176 MSMLAIKYGAINLGQGFPSFDGPEFVKEAAIQAIRDGKNQYARGFGIPDLNIAIAERFKKDTGLVVDPDKEVTVTTGCTEAIGATILGLINPGDEVILFAPFYDSYNATLSMAGATIKTITLRPPDFAVPIEELKSTISKNTRAILINTPHNPTGKMFTREELNSIASLCIENDVLVLTDEVYHKLTFDMEHISIASLPGMFERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGLRQAHTFITFSTSHPFQCGAAVALRAPDSYFIELKRDYMVKRAILMEGSKAIGFKVFPSSGTFFVLVDHTPFGFENDVAFCEYLIKEVGVAAIPSSVFYLNPEEGKNLVRFTFCKDEETLRAAVERMKEKLRK. 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g02268 367 PANTHER FI04487P 1 366 - -
Seca4g02268 367 Pfam Aminotransferase class I and II 11 360 IPR004839 GO:0009058|GO:0030170
Seca4g02268 367 Gene3D Aspartate Aminotransferase, domain 1 1 361 IPR015422 GO:0003824
Seca4g02268 367 SUPERFAMILY PLP-dependent transferases 8 366 IPR015424 -
Seca4g02268 367 Coils Coil 351 367 - -
Seca4g02268 367 CDD AAT_like 11 363 - -
Seca4g02268 367 Gene3D - 23 261 IPR015421 GO:0003824
Seca4g02268 367 FunFam Aminotransferase, class I/classII 23 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g02268 Seca-Chr4 38627386 38628489 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g02268 K23977 - gmx:100818968 672.544