Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g02250 ATGGCTTCTGAGAAGGTTGAAACTGTGGTTGCAGGAAATTACTTAGAAATGGAGAGGGAAGAGGAAGATTCTAAGTCCACTACTAGCAAATTATCTAGGCTCTTCTGGCATGGTGGCTCTGTCTATGATGCATGGTTTAGTTGTGCTTCTAATCAGGTTGCACAAGTGCTATTGACATTACCATATTCATTTTCACAACTGGGGATGGTATCTGGGATTATATTTCAGATTTTTTATGGACTGATGGGAAGCTGGACTGCTTACCTTATCAGTGTCCTTTATGTTGAGTACAGAACCAGAAAGGAGAGAGAAAAGGTTGATTTCAGGAACCATGTTATTCAGTGGTTTGAAGTTCTTGATGGACTTTTAGGCAAACATTGGAGGAATCTTGGTCTCTTTTTCAACTGTACTTTCCTTCTGTTTGGATCAGTGATTCAACTAATTGCCTGTGCAAGTAACATATACTACATAAATGACCATTTGGACAAGAGAACTTGGACTTACATCTTCGGTGCCTGCTGTGCAACAACAGTATTCATCCCTTCTTTCCACAATTACAGAATCTGGTCATTCTTGGGCCTCATGATGACTACTTACACTGCATGGTATATGACCATAGCTTCCCTTGCCCAAGGACAGGTTGAGGGAGTGAAGCACTCAGGGCCAACCAAATTGGTTCTCTACTTCACAGGGGCTACCAACATTCTCTATACTTTTGGTGGACATGCTGTCACAGTGGAAATTATGCATGCAATGTGGAAGCCACAGAAGTTTAAGCTGATATATCTGATCGCAACACTATATGTGCTGACCCTAACTTTACCATCAGCATCTGCAGTCTATTGGGCATTTGGGGACATGCTTCTCACCCATTCCAATGCACTCTCATTGCTCCCTAAGACAGGGTTCAGAGATACAGCTGTCATTCTCATGCTCATTCATCAGTTCATAACTTTTGGATTTGCTTGCACTCCTTTATACTTTGTATGGGAGAAATTCATTGGGGTGCATGAGACCAAGAGTTTGTTCAAAAGGGCATTGGCAAGACTTCCTGTTGTGATTCCAATATGGTTTCTGGCAATCATATTCCCTTTCTTTGGTCCCATTAACTCAACTGTTGGATCTCTCCTAGTCAGCTTCACTGTTTACATAATTCCTGCTTTGGCACACATGGTGACCTTTGCTTCAGCACCAGCTAGGGAGAATGCTGTGGAGAGACCACCATCAATTGTAGGAGGTTGGGTAGGATTGTACTCCATGAATGTCTTTGTGGTGGTATGGGTTTTGGTGATTGGATTTGGGTTAGGAGGATGGGCAAGCATGGTTAATTTCATACATCAAGTCAACACATTTGGGCTATTTGCCAAGTGCTATCAGTGTCCCCCTCACAAGGCCTAA 1398 0.4263 MASEKVETVVAGNYLEMEREEEDSKSTTSKLSRLFWHGGSVYDAWFSCASNQVAQVLLTLPYSFSQLGMVSGIIFQIFYGLMGSWTAYLISVLYVEYRTRKEREKVDFRNHVIQWFEVLDGLLGKHWRNLGLFFNCTFLLFGSVIQLIACASNIYYINDHLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLMMTTYTAWYMTIASLAQGQVEGVKHSGPTKLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKLIYLIATLYVLTLTLPSASAVYWAFGDMLLTHSNALSLLPKTGFRDTAVILMLIHQFITFGFACTPLYFVWEKFIGVHETKSLFKRALARLPVVIPIWFLAIIFPFFGPINSTVGSLLVSFTVYIIPALAHMVTFASAPARENAVERPPSIVGGWVGLYSMNVFVVVWVLVIGFGLGGWASMVNFIHQVNTFGLFAKCYQCPPHKA. 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g02250 465 Pfam Transmembrane amino acid transporter protein 37 430 IPR013057 -
Seca4g02250 465 PANTHER OS05G0424000 PROTEIN-RELATED 43 426 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g02250 Seca-Chr4 38335540 38338677 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g02250 1 464 Organic Solute Cotransporters AT1G77690 87.846 0.0 832
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g02250 K13946 - gmx:100815243 917.916
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g02250 4 38335540 38338677 Seca4g02250 4 38335540 38338677 ECH