Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g02235 ATGCGCCAAGCACTTTTGTTTCACGACGTCAACAACAACAACCACAAGTCAGAGTCAGATAAACACTCACACAAGCCATCTCAGCAGCTAGACTCGCCGCCGGTTTTAGTAACCGGCCGGAGCCGGAGAGTCACTCCGACGAGCCTTTCGATCGAAGCTGATAGCAGCTTAGAGAGGCACTTGCCGAACGGCGATTTTTACATGGGAAGCTTCTCCGGGAACGTTCCCAACGGATCGGGGAAATACCTATGGACGGATGGGTGCATGTACGAGGGTGAATGGAAGAGAGGAAAAGCTTCTGGGAAAGGCAAGTTCTCGTGGCCTTCTGGTGCTACCTACGAGGGTGAGTTCAAATCGGGTCGGATGGAGGGCTTCGGAACTTTTACAGGATCCGACGGAGACACTTACCGTGGGTCATGGAGCTCCGACAGAAAACACGGGTACGGTCAGAAGCGCTATGCGAACGGGGATTTCTATGAAGGTTGCTGGAAGAAGAATCTACAAGAAGGGCATGGGAGGTACGTGTGGAAGAACGGGAACGAGTATGTTGGAGAGTGGAAGAGCGGTGTTATTAGTGGGAGGGGTACTCTTATTTGGTCGAATGGGAATCGTTATGAAGGGCAATGGGAAAATGGGGTACCTAAAGGACAAGGGGTTTTCACTTGGCCTGATGGAAGTTGTTATGTTGGTTGTTGGAACAAGGACCTTAAGATGCATCACTTGAATGGGACTTTCTACCCTGGTAATGGTAATGGAACCTTGCTATTGGGTGAGGATTTCACCTTAACAATGAGGAAGAGGTCTTCGGTTGACAGTGCCAGAGGTTCCAAGATTTGTATATGGGAATCGGATGGAGAAGAAGGTGATATAACTTGTGATATAATCGATAATGTATCCATGTTGTACAGGGATAGAACTGGGTCAGATCCGCAAGAGATTAAGAGTTTTCATCGGAACCCTTGTTGTTTTTCCTCTGAGGTGAAGAGACCGGGGCAAACTATATCCAAGGGGCATAAGAATTACGATCTTATGCTTAATCTGCAACTGGGTATAAGGTACTCTGTTGGGAAGGAAGCTTCCATATCAAGAGAGCTTAAACCGAGTGATTTTGATCCAAATGAGAAGTTTTGGACGAGGTTTCCACCTGAAGGATCCAAGATTACGCCACCACATCAATCAGTGGAGTTCCGCTGGAAGGATTACTGCCCTATGGTGTTTAGACAACTGAGGAAGCTGTTTCAGGTGGATCCTGCTGACTACATGTTAGCTATATGTGGAAATGATGCCCTCAGGGAGCTTTCCTCTCCAGGAAAAAGTGGAAGCTTCTTCTACCTGACACAAGATGACAGGTTTATGATAAAGACCGTGAAGAAATCCGAAGTAAAGGTACTTCTTCGGATGCTTCGAAGTTATTACCAACATGTCTCTCGATATGAGAACTCACTTGTGACAAGATTCTATGGGGTACACTGTGTGAAACCAATTGGAGGCCAAAAGACCCGGTTCATTGTGATGGGAAATCTTTTCTGCTCAGAATTTCCAATTCATAGACGATTTGACTTGAAAGGATCTTCACATGGCCGAACAACTGATAAGACAGAAGAGGAGATTGATGAAACTACCACCCTTAAGGACCTAGATCTCAATTTTGTGTTTCGTCTACAAAGAAATTGGTTCCAGACTCTCATCAAACAAATTGAGCGGGATTGCGAGTTCTTGGAAGCTGAAGGAATTATGGATTACAGTCTTTTGGTTGGCCTTCATTTTCGTGATGACAATAAATATGACAAAATGGGATTGTCACCATTTGTTTTGCGAACTGGTATTGATCAGTATTTCACTTCAGTGCATATAGTAGTAAGTAGACAAGGTTTATGTAACAGTATGTTAAAAGAATTTGTGTTGTGTCTTTTAGGCAAGCGGGATTCTTATCAGAATGAAAAGTTCATGCGAGGTTATCGCTTCCTTGAAGCAGAGCTACAGGACAGGGATCGAGTAAAATCTGGCCGGAAATCATTGATTAGGTTGGGAGCCAATTTGCCTGCAAGAGCTGAACGCATGGCTCGGAGGAGTGATTTTGATCAATACAACACTGTTGGAATTAGCCATTTGACCCCTTATTGCAGTGGGGAGACTTACGATGTTCTTCTATATTTCGGGATTATTGACATTTTACAAGATTACGATATCAGCAAAAAGCTGGAGCATGCATACAAGTCATTGCAGGTTGACGACCCTTCATCAATCTCAGCTGTTGATCCAAAACTCTACTCCAGGAGGTTCCGTGATTTTGTGGGAAGAATATTCATTGAAGACTGGTAG 2322 0.4466 MRQALLFHDVNNNNHKSESDKHSHKPSQQLDSPPVLVTGRSRRVTPTSLSIEADSSLERHLPNGDFYMGSFSGNVPNGSGKYLWTDGCMYEGEWKRGKASGKGKFSWPSGATYEGEFKSGRMEGFGTFTGSDGDTYRGSWSSDRKHGYGQKRYANGDFYEGCWKKNLQEGHGRYVWKNGNEYVGEWKSGVISGRGTLIWSNGNRYEGQWENGVPKGQGVFTWPDGSCYVGCWNKDLKMHHLNGTFYPGNGNGTLLLGEDFTLTMRKRSSVDSARGSKICIWESDGEEGDITCDIIDNVSMLYRDRTGSDPQEIKSFHRNPCCFSSEVKRPGQTISKGHKNYDLMLNLQLGIRYSVGKEASISRELKPSDFDPNEKFWTRFPPEGSKITPPHQSVEFRWKDYCPMVFRQLRKLFQVDPADYMLAICGNDALRELSSPGKSGSFFYLTQDDRFMIKTVKKSEVKVLLRMLRSYYQHVSRYENSLVTRFYGVHCVKPIGGQKTRFIVMGNLFCSEFPIHRRFDLKGSSHGRTTDKTEEEIDETTTLKDLDLNFVFRLQRNWFQTLIKQIERDCEFLEAEGIMDYSLLVGLHFRDDNKYDKMGLSPFVLRTGIDQYFTSVHIVVSRQGLCNSMLKEFVLCLLGKRDSYQNEKFMRGYRFLEAELQDRDRVKSGRKSLIRLGANLPARAERMARRSDFDQYNTVGISHLTPYCSGETYDVLLYFGIIDILQDYDISKKLEHAYKSLQVDDPSSISAVDPKLYSRRFRDFVGRIFIEDW. 774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g02235 773 PIRSF PIP5K_plant 4 269 IPR017163 GO:0005524|GO:0016308
Seca4g02235 773 PIRSF PIP5K_plant 258 773 IPR017163 GO:0005524|GO:0016308
Seca4g02235 773 MobiDBLite consensus disorder prediction 13 27 - -
Seca4g02235 773 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 153 251 - -
Seca4g02235 773 Gene3D - 508 769 - -
Seca4g02235 773 FunFam Phosphatidylinositol 4-phosphate 5-kinase 326 507 - -
Seca4g02235 773 SMART PIPK_2 366 770 IPR002498 GO:0016307|GO:0046488
Seca4g02235 773 MobiDBLite consensus disorder prediction 1 44 - -
Seca4g02235 773 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE 76 769 IPR023610 -
Seca4g02235 773 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 62 166 - -
Seca4g02235 773 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 425 767 IPR002498 GO:0016307|GO:0046488
Seca4g02235 773 Gene3D - 69 125 - -
Seca4g02235 773 Gene3D - 161 211 - -
Seca4g02235 773 Gene3D - 212 258 - -
Seca4g02235 773 Pfam MORN repeat 90 111 IPR003409 -
Seca4g02235 773 Pfam MORN repeat 113 135 IPR003409 -
Seca4g02235 773 Pfam MORN repeat 182 204 IPR003409 -
Seca4g02235 773 Pfam MORN repeat 67 89 IPR003409 -
Seca4g02235 773 Pfam MORN repeat 205 226 IPR003409 -
Seca4g02235 773 Pfam MORN repeat 136 157 IPR003409 -
Seca4g02235 773 Pfam MORN repeat 159 180 IPR003409 -
Seca4g02235 773 ProSiteProfiles Phosphatidylinositol phosphate kinase (PIPK) domain profile. 335 769 IPR002498 GO:0016307|GO:0046488
Seca4g02235 773 FunFam Phosphatidylinositol 4-phosphate 5-kinase 97 141 - -
Seca4g02235 773 SMART morn 111 132 IPR003409 -
Seca4g02235 773 SMART morn 134 155 IPR003409 -
Seca4g02235 773 SMART morn 88 109 IPR003409 -
Seca4g02235 773 SMART morn 65 86 IPR003409 -
Seca4g02235 773 SMART morn 180 201 IPR003409 -
Seca4g02235 773 SMART morn 203 224 IPR003409 -
Seca4g02235 773 SMART morn 157 178 IPR003409 -
Seca4g02235 773 CDD PIPKc_AtPIP5K_like 340 768 - -
Seca4g02235 773 MobiDBLite consensus disorder prediction 28 44 - -
Seca4g02235 773 FunFam Phosphatidylinositol 4-phosphate 5-kinase 189 257 - -
Seca4g02235 773 SUPERFAMILY SAICAR synthase-like 336 769 - -
Seca4g02235 773 Gene3D Phosphatidylinositol Phosphate Kinase II Beta 326 507 IPR027484 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g02235 Seca-Chr4 38048426 38053824 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g02235 39 772 Acyl Lipid Metabolism Gene Families AT1G21980 72.446 0.0 1088
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g02235 K00889 - gmx:100813118 1239.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g02235 4 38048426 38053824 Seca4g02235 4 38048426 38053824 ECH