Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g02196 ATGGGTTACACTGGAAATGAAGAATCAGACACCCAAACAGGTCAAAACACAAAAAGTCCTTCCCTTTTCAGGTACAATTCACCCTTTGTTCAGATTGTACTTATTGGGTTTGTCTGCTTTTGTTGCCCTGGCATGTTCAATGCCCTCTCTGGAATGGGTGGTGGTGGCCAAGTCAATGCCACAGCCTCCAACAATTCCCTCACTGCCCTTTACACCACCTTCGCAATTTTCGGCATCCTTGGTGGTGGCATCTACAACATCCTAGGCCCCCACCTAACTCTTTTCGCAGGTTGTTCCACCTATGTTCTCTATGCTGGTTCCTTTCTCTATTACAACCATCACCAACACCAAGCCTTTGCTATAGTTGCTGGTGCTTTTCTTGGGATTGGAGCAGGGCTCCTCTGGGCTGCACAGGGTGCTATTATGACCTCTTACCCTCCTGTGAACCGTAAAGGCACTTACATTTCAATTTTCTGGAGCATCTTCAATATGGGTGGTGTGATTGGTGGTTTAATTCCTTTCATTTTGAATTACAATCGTGGTGATGATGCTGTTACTGTGAATGATGGAACTTATATAGGCTTTATGGCTTTTATGTCACTTGGTACCATTTTGTCTTTGACTATTTTGCCAGCTAGTAAGGTTGTTCGTGATGATGGGACAAGGTGTACCAATATGTTGTACTCCAATGTTGCAACTGAGTCTGTTGAGATTCTCAAGCTGTTCTACAATTGGAAGATGCTTCTCATGCTTCCTGCTGCTTGGTCTAGCAATTTCTTTTACACATACCAATTCAACCATGTCAACAAGACACAGTTTACTTTGAGAACTAGAGGGTTGAACAATGTCTTCTATTGGGGAGCACAGATGTTGGGATCAATTGGGATTGGGTACATAATGGATTTCAGTTTTAAGAGCAGAAGGAAGAGAGGGATTGTGGGAATTGCTGTGGTTGCTATTCTTGGGTCTCTCATTTGGGGTGGTGCACTTGCTAATCAGATTAAACACCACAAAGGGAAGGTCTTGGATTTTAAGGAATCACGTTCTAGCTTTGCTGGACCCTTTGTCTTGTATTTTTGTTTTGGTTTGCTGGATGCTATGTTCCAGAGCATGGTCTACTGGGTTATTGGAGCCCTGGCTAATGATTCTGAGATTCTTAGCAGGTACACTGGGTTCTATAAAGGCATACAAAGTGCAGGGGCAGCAGTTGCTTGGCAAATTGATAACCACAATGTATCTCCCATGTCTCAATTGATTGTGAATTGGGTGCTAACTACAATAAGCTATCCGTTAATGTTGGTTCTGGTTGTGTTGGCTGTGAGAGAGGTAAGTAAGGCAGAAGAAGAACCTGTCAAACAGTTTGCTCCTTCTTCAGCTGACAATTGCTTTGCCCAATGA 1398 0.4342 MGYTGNEESDTQTGQNTKSPSLFRYNSPFVQIVLIGFVCFCCPGMFNALSGMGGGGQVNATASNNSLTALYTTFAIFGILGGGIYNILGPHLTLFAGCSTYVLYAGSFLYYNHHQHQAFAIVAGAFLGIGAGLLWAAQGAIMTSYPPVNRKGTYISIFWSIFNMGGVIGGLIPFILNYNRGDDAVTVNDGTYIGFMAFMSLGTILSLTILPASKVVRDDGTRCTNMLYSNVATESVEILKLFYNWKMLLMLPAAWSSNFFYTYQFNHVNKTQFTLRTRGLNNVFYWGAQMLGSIGIGYIMDFSFKSRRKRGIVGIAVVAILGSLIWGGALANQIKHHKGKVLDFKESRSSFAGPFVLYFCFGLLDAMFQSMVYWVIGALANDSEILSRYTGFYKGIQSAGAAVAWQIDNHNVSPMSQLIVNWVLTTISYPLMLVLVVLAVREVSKAEEEPVKQFAPSSADNCFAQ. 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g02196 465 SUPERFAMILY MFS general substrate transporter 32 449 IPR036259 -
Seca4g02196 465 Gene3D MFS general substrate transporter like domains 28 220 IPR036259 -
Seca4g02196 465 Gene3D MFS general substrate transporter like domains 242 450 IPR036259 -
Seca4g02196 465 Pfam Ion channel regulatory protein UNC-93 56 325 IPR010291 -
Seca4g02196 465 CDD MFS_unc93-like 30 430 - -
Seca4g02196 465 PANTHER ET TRANSLATION PRODUCT-RELATED 29 447 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g02196 Seca-Chr4 37221034 37223811 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g02196 119 404 Organic Solute Cotransporters AT2G29650 23.226 6.74e-06 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g02196 - - gmx:100796714 790.415
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g02196 4 37221034 37223811 Seca4g02196 4 37221034 37223811 ECH
Seca4g02196 4 37221034 37223811 Seca4g02196 4 37221034 37223811 PCT