Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g02191 ATGGAGCAAGGGAAGCAAGGAGTGATGGTGGCGAAGAGCCTTCAGAACCCCATAGAGCAGCTCCAAGCACGCTTCAAAGAGCTAGAGAATGGCTTCAGGCTCTGGCTTTCCAAGCAGTCTCTCCCCGTTGAGGCCGCCGTCGTCACCACCACCAGCGCCGCCCAAGGTGCCGCTATCGGTGCTTTTATGGGCACCCTCACCGCCGATGCCTCCTCCGCCTTTCCCACCCCTCCCCCTAACGCCTCTCTCAACCCTCAAGCCATGGCCTCTCTCCAGCAAGCCCAGGCTCTTTCTGGAGGTCCTTTAGTTCAAGCTCGCAACTTTGCTGTCATGACTGGAGTGAATGCCGGTATTTCATGTGTCTTGAAAAGGTTAAGGGGGAAAGAAGATGTTCAGTCCAGCATGGCGGCAGCTTTTGGTTCAGGGGCCATGTTTTCATTGGTAAGTGGCATGGGTGGACCAAATCAAGCTGCGAATGCAGTCACTTCTGGACTTTTCTTTGCACTTGTTCAAGGTGGACTTTTCCAGTTAGGACAAAAGTTTTCTCAACCACCTGCTGAAGATACTCATTATGTTAAAACAAGACACATGTTACACAACCTTGGTCTTCAGAGTTACGAGAAGAATTTTAAGAAAGGCTTGTTAACGGACAACACTTTGCCTTTACTCACTGACAGTGCTCTCAGAGATGTGAGGATTCCTCCTGGACCCAGGCTTTTGATTCTTGACCACATCCACAGGGACCCAGATTTGAGAGAGAAGAGAGGAAGCCGGAGTTGA 780 0.5103 MEQGKQGVMVAKSLQNPIEQLQARFKELENGFRLWLSKQSLPVEAAVVTTTSAAQGAAIGAFMGTLTADASSAFPTPPPNASLNPQAMASLQQAQALSGGPLVQARNFAVMTGVNAGISCVLKRLRGKEDVQSSMAAAFGSGAMFSLVSGMGGPNQAANAVTSGLFFALVQGGLFQLGQKFSQPPAEDTHYVKTRHMLHNLGLQSYEKNFKKGLLTDNTLPLLTDSALRDVRIPPGPRLLILDHIHRDPDLREKRGSRS. 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g02191 259 Pfam SAM domain (Sterile alpha motif) 198 247 IPR001660 GO:0005515
Seca4g02191 259 Pfam Tim17/Tim22/Tim23/Pmp24 family 48 167 - -
Seca4g02191 259 Gene3D - 195 255 IPR013761 -
Seca4g02191 259 PANTHER MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM22 13 233 IPR039175 GO:0042721|GO:0045039
Seca4g02191 259 Coils Coil 11 31 - -
Seca4g02191 259 SUPERFAMILY SAM/Pointed domain 194 249 IPR013761 -
Seca4g02191 259 CDD SAM_superfamily 196 247 - -
Seca4g02191 259 FunFam mitochondrial import inner membrane translocase subunit TIM22-like 195 254 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g02191 Seca-Chr4 37145849 37151262 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g02191 - - gmx:100813121 447.973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g02191 4 37145849 37151262 Seca4g02191 4 37145849 37151262 ECH