Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Seca4g02139 | ATGTGTATATGTGCAGCTCCGGTGGAGAAGGTTATTAGACTTGTGGTGATCAAAGAGATCAAGGGTGCACAGTATGGGGTTCAGATTGAGACTGCAGTGAGGGACAGGTTGGCAGCTGATGACAAATATGAGGAAGAAGAAGAGGAAGCTTTGGAAAAAGTTGTTGAGTTTTTCCAGTCTAAGTACTTCAAGAAACATTCAGTAATCACTTACCATTTCCCAGCAAATTCTCAAACTGCTGAGATTGTGGTATCTCTGGAGGGGAAAGAAGACTCCAAGTATGTAGTAGAGAATGCCAATGTGGTAGAGACCATCAAGAAATGGTACCTTGGTGGCTCATCCGCGGTGTCTCCCTCAACTATTTCATCTTTGGCTACCATTCTCTCAGAGGAGTTGTCCAAGTGA | 405 | 0.4395 | MCICAAPVEKVIRLVVIKEIKGAQYGVQIETAVRDRLAADDKYEEEEEEALEKVVEFFQSKYFKKHSVITYHFPANSQTAEIVVSLEGKEDSKYVVENANVVETIKKWYLGGSSAVSPSTISSLATILSEELSK. | 135 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Seca4g02139 | 134 | Gene3D | - | 4 | 109 | IPR016088 | - | |
| Seca4g02139 | 134 | Pfam | Chalcone-flavanone isomerase | 3 | 130 | IPR016087 | - | |
| Seca4g02139 | 134 | SUPERFAMILY | Chalcone isomerase | 3 | 133 | IPR036298 | GO:0016872 | |
| Seca4g02139 | 134 | Coils | Coil | 29 | 49 | - | - | |
| Seca4g02139 | 134 | PANTHER | CHALCONE--FLAVONONE ISOMERASE 3-RELATED | 3 | 134 | IPR044191 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Seca4g02139 | Seca-Chr4 | 36175473 | 36176272 | Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Seca4g02139 | K01859 | - | gmx:778027 | 218.779 |