Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g02111 ATGGGTGAGGGAGAACGTTTTCAGCTGGGGACTGTTGGCGCTTTGACTCTTTCTGTGGTGTCATCAGTGTCCATTGTAATTTGCAATAAGGCGCTGATGAGCTCATTGCATTTCATTTTTGCAACAACTTTGACAAGCTGGCATCTGCTTGTCACATTTTGTTCCCTTCATGTGGCACTCAGAATGAGATTCTTTGAGCACAAACCTTTTGAGCAGAAAGCTGTAATGGGATTTGGGATTTTAAATGGAATCTCAATTGGACTTTTAAATTTGAGCCTGGGATTCAATTCTGTTGGCTTCTATCAAATGACTAAGCTGGCAATCATTCCTTGTACTGTACTGTTGGAGACCCTTTTCCTTGGGAAGAGATTCAGTAAAAGAATTCAACTTTCTTTAGCTACCCTCCTTCTTGGTGTTGGGATTGCAACTGTCACAGATTTGCAGCTGAATGCTCTGGGCTCCTTCTTATCTTTCCTGGCGGTGATTACGACGTGTGTTGCTCAGATTGTATCCTTAAATTTTTTTGAAAGTTTTACAGAGATGATTATCTGGTTTCTTTTTTTCATGACCAGTTCAACTATTTCTTTGGGTGTCTTGTCCTTAATTAGTTACTTTCAGATGACAAATACAATTCAGAAGAAGTATAAGGTTTCTTCCACCCAGCTTCTGTATCAATCATGTCCATATCAAGCAGCAACCTTGTTAATCACTGGTCCATACCTGGATAAACTTTTGACCAGCCAAAATGTTTTTGCTTTCAAGTACACAACACAAGTGACGGTTTTCATAGTTCTGTCTTGCCTTATCTCCATCTCTGTCAATTTTAGCACATTTCTTGTTATTGGAAAGACATCTCCAGTTACCTATCAGGTGCTTGGACACCTGAAGACATGCCTTGTATTGGCATTTGGTTATATTTTACTCCATGACCCATTCAGCTGGAGAAACATACTGGGTATTATGATTGCCATGATTGGGATGATTCTATATTCTTACTGTTGTACTCTTGAAAATCAGCAAAAATCTGTTGAAGCTTCAGCACAAGCATCCCAGGCAAGAGATGCTGAATCTGATCCTCTGATTAATGTGGAAAATGGAAGTGCAGTTGTGACTGATACTGTTGGACAGAAGTCCACTGTATGGAGCAAAGACAGAGACTAG 1161 0.3997 MGEGERFQLGTVGALTLSVVSSVSIVICNKALMSSLHFIFATTLTSWHLLVTFCSLHVALRMRFFEHKPFEQKAVMGFGILNGISIGLLNLSLGFNSVGFYQMTKLAIIPCTVLLETLFLGKRFSKRIQLSLATLLLGVGIATVTDLQLNALGSFLSFLAVITTCVAQIVSLNFFESFTEMIIWFLFFMTSSTISLGVLSLISYFQMTNTIQKKYKVSSTQLLYQSCPYQAATLLITGPYLDKLLTSQNVFAFKYTTQVTVFIVLSCLISISVNFSTFLVIGKTSPVTYQVLGHLKTCLVLAFGYILLHDPFSWRNILGIMIAMIGMILYSYCCTLENQQKSVEASAQASQARDAESDPLINVENGSAVVTDTVGQKSTVWSKDRD. 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g02111 386 SUPERFAMILY Multidrug resistance efflux transporter EmrE 48 144 - -
Seca4g02111 386 SUPERFAMILY Multidrug resistance efflux transporter EmrE 256 331 - -
Seca4g02111 386 PANTHER SOLUTE CARRIER FAMILY 35 12 334 - -
Seca4g02111 386 Pfam Triose-phosphate Transporter family 20 331 IPR004853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g02111 Seca-Chr4 35822539 35826723 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g02111 1 362 Organic Solute Cotransporters AT1G21870 23.077 3.48e-18 83.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g02111 K15285 - gmx:100786018 557.755