Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g02110 ATGGGCGAGGGAGAAAAATTTCAGCTGGGAACTGCTGGCGCGTTGAGTCTATCCGTCGTGTCATCAGTGTCGATTGTGATTTGCAATAAGGCGCTGATGAGCTCACTGCACTTCATTTTCGCTACAACTTTGACAAGCTGGCATCTTCTTGTCACATTTTGTTCTCTTCATGTGGCACTAAAAATGAGATTTTTTGAGCACAAACCTTTTGACCAGAAATCTGTGATGGGATTTGGAATTCTAAATGGAACCTCAATTGGACTTTTAAATTTGAGCCTCGGTTTCAATTCTGTCGGCTTCTACCAGATGACTAAGCTGGCAATCATTCCATGTACTATTCTGTTGGAGATCCTTTTTCTTGGGAAGAAATTCAGCAAAAGAATACAGTTCTCCCTTGCGGTCCTCCTTCTTGGTGTTGGGATTGCAACAGTTACTGATTTGCAGCTCAATGCTTTGGGCTCTTTCTTATCTTTTCTAGCAGTGATTACAACATGCGTTGCTCAGATTATGACAAACACCATCCAGAAGAAGTTTAAGGTTTCTTCTACCCAGCTTCTGTATCAATCATGTCCATATCAGGCAGCAACCTTGTTAATATCTGGACCATATTTGGATAAAGTTCTGACTAACCTAAATGTCTTTGCTTTCAAGTACACAACAGAAGTGACGGTTGCCATTATTCTTTCATGCCTTATCTCGATCTCTGTAAATTTTAGTACATTTCTTGTAATTGGAAAGACATCTCCAGTAACCTATCAGGTTCTTGGACATCTGAAGACATGCCTTGTATTGGCTTTTGGATATATTATTGTCCATGACCCTTTCAGCTGGAGGAACGTACTGGGGATTTTGGTAGCCATGGTTGGGATGATCCTATATTCCTATAATTGCATTCTTGAGAATCAGCAAAAAGCAGCTGAAACTGCAGCACAAGCATCACAGGCAAGAGAAGGTGAATCTGATCCTCTCATTAATGTGGAAAGTGGAAGTACAGTATTGAGCAAAAGGCTTAAATACTAG 1020 0.4069 MGEGEKFQLGTAGALSLSVVSSVSIVICNKALMSSLHFIFATTLTSWHLLVTFCSLHVALKMRFFEHKPFDQKSVMGFGILNGTSIGLLNLSLGFNSVGFYQMTKLAIIPCTILLEILFLGKKFSKRIQFSLAVLLLGVGIATVTDLQLNALGSFLSFLAVITTCVAQIMTNTIQKKFKVSSTQLLYQSCPYQAATLLISGPYLDKVLTNLNVFAFKYTTEVTVAIILSCLISISVNFSTFLVIGKTSPVTYQVLGHLKTCLVLAFGYIIVHDPFSWRNVLGILVAMVGMILYSYNCILENQQKAAETAAQASQAREGESDPLINVESGSTVLSKRLKY. 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g02110 339 SUPERFAMILY Multidrug resistance efflux transporter EmrE 220 294 - -
Seca4g02110 339 PANTHER SOLUTE CARRIER FAMILY 35 14 295 - -
Seca4g02110 339 Pfam Triose-phosphate Transporter family 21 294 IPR004853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g02110 Seca-Chr4 35810352 35814785 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g02110 22 325 Organic Solute Cotransporters AT1G77610 24.281 5.84e-22 93.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g02110 K15285 - gmx:100788989 584.334