Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g02067 ATGGCTCTCACTCTCACTCTCAGCATCTCAGTGAGCTTCCCGCAAGTACACTTACACTCTCTCAAATCCAAACCCAAACCAACACTTTCTTCCTTCACATCTGCTTCTTCCAATTCCTTAGCTCAAATCAGTGTCGGTGAAGATTTACCTTCTAACTACGGGGATTGGGTTCCCAAGCCTGACCCTGAGCTTCGCAGAAGAGCCGGTATTCTACTCCATCCGACGTCGTTTCGAGGCCCCTATGGGATCGGCGATCTTGGTGATGAGGCCTTCCGTTTCATTGACTGGCTCCATGACTCTGGTTGCTCCCTTTGGCAGGTTCTTCCTCTTGTGCCTCCTGGTCGAAAGGCTAACGAAGAAGGATCCCCTTACTCCGGCCAGGATGCCAATTGTGGCAACACCCTCTTGATCTCTCTTGAACAACTTGTTGAGGATGGATTGTTGGAAAAACACGAGCTTCCCAAACCAATTGATGCAGAGCGCGTCAATTTTTCGCTTGTTGCTGACCTTAAGGATCCTTTGATAACTAAGGCTGCAGAGAGGCTCATTTCAAGTAAAGGGGAACTCAAATCACAGCTCGAGAATTTCCGTAGGGACCCTAACATATCAAGCTGGCTTGAAGATGCAGCTTATTTTGCTGCTATTGACGACAGTTTAAACACATTCAGCTGGTACAATTGGCCTGAACCTTTAAGAAACCGCCGTCTTGTAGCTCTAGAAGAGATTTACCAACAAAAGCAACATTTTATAAATGTATTTATTGCACAACAGTTCTTGTTCCAAAGGCAATGGCAGAAAGTTCGCAACTATGCACAGAGTAAGGGAATCAGGATAATGGGAGACATGCCCATATATGTTGGTTATCATAGTGCAGATGTTTGGGCAAATAAGAACCAATTTTTACTGAACAGGAAAGGCTTTCCTCTTTTAGTTAGTGGTGTTCCTCCTGATGCATTCAGTGAAACCGGTCAGCTGTGGGGCAGCCCTCTGTATGATTGGAATGCCATGGAGAAAGAAGGATACTCATGGTGGATACGCCGCATACGACGTGCACAGAATTTATATGATGAATTTAGGATTGACCACTTTAGAGGATTAGCTGGATTTTGGGCTGTTCCCTCTGGTGAGTCTACAAGCTTATTTCACCTTTTTTGCTTGGATTTATGTTTTCACAACACATTTATGCTCTATATATGTGCAGAAGCAAAAGTAGCTATGGTTGGAAAATGGAAGGTAGGACCTGGAATATCCTTCTTCGATGCCATTTTCAGAGCTGTTGGAAGGATTAATATTATAGCAGAAGACTTGGTATGTATTATCAAAACTAGTTCTGAAAACGTTTTCATTCATACATGA 1356 0.4381 MALTLTLSISVSFPQVHLHSLKSKPKPTLSSFTSASSNSLAQISVGEDLPSNYGDWVPKPDPELRRRAGILLHPTSFRGPYGIGDLGDEAFRFIDWLHDSGCSLWQVLPLVPPGRKANEEGSPYSGQDANCGNTLLISLEQLVEDGLLEKHELPKPIDAERVNFSLVADLKDPLITKAAERLISSKGELKSQLENFRRDPNISSWLEDAAYFAAIDDSLNTFSWYNWPEPLRNRRLVALEEIYQQKQHFINVFIAQQFLFQRQWQKVRNYAQSKGIRIMGDMPIYVGYHSADVWANKNQFLLNRKGFPLLVSGVPPDAFSETGQLWGSPLYDWNAMEKEGYSWWIRRIRRAQNLYDEFRIDHFRGLAGFWAVPSGESTSLFHLFCLDLCFHNTFMLYICAEAKVAMVGKWKVGPGISFFDAIFRAVGRINIIAEDLVCIIKTSSENVFIHT. 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g02067 451 SUPERFAMILY (Trans)glycosidases 48 436 IPR017853 -
Seca4g02067 451 PANTHER 4-ALPHA-GLUCANOTRANSFERASE DPE1, CHLOROPLASTIC/AMYLOPLASTIC 27 379 IPR003385 GO:0004134|GO:0005975
Seca4g02067 451 Pfam 4-alpha-glucanotransferase 72 439 IPR003385 GO:0004134|GO:0005975
Seca4g02067 451 Coils Coil 179 199 - -
Seca4g02067 451 Gene3D Glycosidases 63 446 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g02067 Seca-Chr4 35186098 35189728 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g02067 21 445 Glycoside Hydrolase AT5G64860 67.290 0.0 593
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g02067 K00705 - gmx:100795007 709.138
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g02067 4 35186098 35189728 Seca4g02067 4 35186098 35189728 ECH