Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g02060 ATGGAGAATAGTAAGGAGAAAAACGCTCCTTGGTTATCGGTGCCACAGTTTGGGGACTGGGATCAGAAGGGCCAATTGCCAGATTACTCACTGGATTTCTCAAAAATCCGGGAAATGAGGAAGCAAAACAAGACAAATGTTTCGAGGGCAAGTCTTGGCAATGAAGAGGAGCTTGTGGCTTCTACCACTAACAATATTAACACTGGTCATAGTGAGCGCCAGCATCCCCACTACCACCAAACCAACTCTCCAACTACAAGGAGGAGCTTCCTCAGCTACTTCAACTGTTGTGTAAAAGCCTGA 303 0.462 MENSKEKNAPWLSVPQFGDWDQKGQLPDYSLDFSKIREMRKQNKTNVSRASLGNEEELVASTTNNINTGHSERQHPHYHQTNSPTTRRSFLSYFNCCVKA. 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g02060 100 PANTHER PATHOGENIC TYPE III EFFECTOR AVIRULENCE FACTOR AVR AVRRPT-CLEAVAGE: CLEAVAGE SITE PROTEIN 1 99 - -
Seca4g02060 100 MobiDBLite consensus disorder prediction 1 25 - -
Seca4g02060 100 MobiDBLite consensus disorder prediction 66 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g02060 Seca-Chr4 35086635 35090714 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g02060 - - gmx:100796591 187.193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g02060 4 35086635 35090714 Seca4g02060 4 35086635 35090714 ECH