Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g02054 ATGGCTTCTACTTCAATCACCACTTTCTCCATCTACTCGCAATCTCAATCAAAGTTCTTCAATTCGCATGGGCAACCACTACTTCATAGCCGCAACAAACACGCATCAATTTCGCTTCAACCAGCTATAGTTCGTGCCGCCCTTTTTTCAGTGTGTTCTTGTTCCCGCACTCCGTGCACACCCTCCTCAAGTTTCTCCCCACAAAAGTGTTTATCCAAGTTTATTTCAGAAAATATAGCCTTTTTACTTATTGGGTCGTTTATCTTCACGGGTTGCTTCAGCAAAAGGGCTGCTTTTGCAGTAGCAATGCCTCCCGTCAGTTCTGGTGGAATGTTGGAGGAGAAGGTGAAGCCCATGGAAGGGAAAAGCGAGGAGGAGGAAATGTACGAGAAGATTTTGGAGAAGGATCCGAGAAATGTTGAGGCTCTCAAGGTGATTTTGTTTGGTAAAATTAGGAGAGGGAAGTCCAAGGAGGCTGTGAAGTTTGTGGAGAGTTTGATTGATGTGGAGCCAAATGAGGTTGAATGGAGGCTTTTGCTGGCACTGTGTTATGAGACAATGGGGCACTTGAGTAAGGCTAAAAGATTGTTCAGGGAAATCTTGGGGAAAAGGCCTCTTCTTGTAAGAGCTCTGCATGTAGGCCTGGCTATGGTGATGCACAAAAATCATGAAGGTCCTGCTGTATTTGAAATGCTGAATAAGGCTCAAGAGTTAGCTTCTAATGAAAACAGAGTTACAGAGGAGAGAAATATAAGAATCTTAATTGCACAAATGCTTGTTGTACAGGGTGATTTAGAGGAGGGCTTAAAAAGATTTCAAGATTTGATTGATCAAAATCCTGGAGATTTTAGGCCTTATCTTTGCCAGGGAATAATATACAGTCTCCTGGATAGAAAGGAGGAAGCTGCACAGCAGTTTGAAACATATCAAACTCTTGTGCCTGAAGAGTTTCCTCAGAGGGGATTTCTTGATGATGTTGCCTTAGCAGCAAAAAGAACATCCAAAGAACAGTTTCAGAAGGAGTTCAGAGATCAATTTTCTTACCGGAAGTAG 1053 0.4274 MASTSITTFSIYSQSQSKFFNSHGQPLLHSRNKHASISLQPAIVRAALFSVCSCSRTPCTPSSSFSPQKCLSKFISENIAFLLIGSFIFTGCFSKRAAFAVAMPPVSSGGMLEEKVKPMEGKSEEEEMYEKILEKDPRNVEALKVILFGKIRRGKSKEAVKFVESLIDVEPNEVEWRLLLALCYETMGHLSKAKRLFREILGKRPLLVRALHVGLAMVMHKNHEGPAVFEMLNKAQELASNENRVTEERNIRILIAQMLVVQGDLEEGLKRFQDLIDQNPGDFRPYLCQGIIYSLLDRKEEAAQQFETYQTLVPEEFPQRGFLDDVALAAKRTSKEQFQKEFRDQFSYRK. 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g02054 350 PANTHER TRANSMEMBRANE PROTEIN 229 319 - -
Seca4g02054 350 Pfam Tetratricopeptide repeat 152 206 - -
Seca4g02054 350 SUPERFAMILY TPR-like 126 315 IPR011990 GO:0005515
Seca4g02054 350 Gene3D Tetratricopeptide repeat domain 121 332 IPR011990 GO:0005515
Seca4g02054 350 Pfam Tetratricopeptide repeat 256 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g02054 Seca-Chr4 34967839 34973412 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g02054 - - gmx:100795327 520.005