Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g02047 ATGTCTTCTACAAGCAAGGGTGATAGGAAGGCTTCCCTTGATGCAGCATCATGGCTGTTCAACGTAGTCACATCTGTGGGAATAATCCTTGTGAATAAAGCCCTGATGGCTACATATGGTTTTAGTTTCGCTACGACTTTAACTGGTATGCATTTTGCCACGACAACCTTGTTGACGGTCATTCTTAAATCGCTGGGATATATCCAAACCTCTCATCTTCCATTATCTGATATCATCAAATTTGTCTTATTTGCAAATTTCTCCATTGTTGGAATGAATGTGAGTTTAATGTGGAACTCTGTTGGTTTCTATCAGATCGCTAAGCTGAGTATGATTCCAGTATCTTGCTTCCTGGAAGTCGTCTTAGACAATGTGCGATATTCAAGGGACACAAAGCTTAGTATTGTACTGGTTTTGCTTGGTGTTGCTGTCTGTACAGTCACTGATGTCAGTGTCAATGCAAAGGGTTTTATAGCTGCTTTAATAGCAGTTTGGAGCACAGCACTGCAGCAATATTATGTGCATTTTCTTCAAAGGAAGTATTCTATTGGATCATTTAACTTGTTGGGCCACACTGCACCAGCACAGGCAGGAAGCTTACTGTTAGTAGGCCCCTTCCTGGACTATTGGTTGACAAACAAACGAGTCGATACCTACAACTATGGTTTGACATCCATTCTGTTCATCATTCTGTCTTGCACTATTGCCGTTGGGACAAACCTCAGCCAGTTCATCTGCATTGGTAGGTTTACGGCCGTAACATTCCAAGTCCTTGGCCACATGAAGACTATTCTGGTCCTGATCTTAGGATTCATTTTCTTTGGAAAAGAAGGTCTCAATCTACAAGTTGTTCTAGGCATGATCATTGCCATAGCGGGAATGATTTGGTATGGCAATGCTTCTTCTAAGCCAGGGGGTAAGGAGCGTCGTAGCTTTTCCATTCCTTCCACCAAAACGCAAGATTATGGTGCACTACCTGTGTCCTCTGATACAGATGAGAAGGTATAG 1008 0.4236 MSSTSKGDRKASLDAASWLFNVVTSVGIILVNKALMATYGFSFATTLTGMHFATTTLLTVILKSLGYIQTSHLPLSDIIKFVLFANFSIVGMNVSLMWNSVGFYQIAKLSMIPVSCFLEVVLDNVRYSRDTKLSIVLVLLGVAVCTVTDVSVNAKGFIAALIAVWSTALQQYYVHFLQRKYSIGSFNLLGHTAPAQAGSLLLVGPFLDYWLTNKRVDTYNYGLTSILFIILSCTIAVGTNLSQFICIGRFTAVTFQVLGHMKTILVLILGFIFFGKEGLNLQVVLGMIIAIAGMIWYGNASSKPGGKERRSFSIPSTKTQDYGALPVSSDTDEKV. 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g02047 335 MobiDBLite consensus disorder prediction 312 326 - -
Seca4g02047 335 PANTHER SOLUTE CARRIER FAMILY 35 17 301 - -
Seca4g02047 335 MobiDBLite consensus disorder prediction 302 335 - -
Seca4g02047 335 Pfam Triose-phosphate Transporter family 24 297 IPR004853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g02047 Seca-Chr4 34834224 34840779 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g02047 18 333 Organic Solute Cotransporters AT1G77610 25.076 6.39e-12 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g02047 K26224 - gmx:100800306 612.453
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g02047 4 34834224 34840779 Seca4g02047 4 34834224 34840779 ECH