Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g01997 ATGGGAGCGTCTAACTCGGCGGGGCCGAGGGTTTCGGAGGAACAGCGGGAGGCGGAAACCGTCGCAGCCTCCACCGGATCTCTTCCCGTGCTTCAGAAAGCTTTCTCCAAGCTCGCCAATCCCGAAACAAACGCTGTTCCCTTAGAAAATCTACAGCAATGCTTTAGTTTCGGTGGCGAAGGTCGAAGTAATTATGCGGGGAACGTGCCAGATTTGTTTCCTGTGTTGTTGGATCACTTAGGTTCATCCCTAATTGATCAATTTTTCGTGCCTGATAAAGGGGGAATAAGTTGGGTTGAATTTGTGAGAGGTTATAACAAGTGTTGTGCCAGGGTGTCTGCGTCGATTTTGCTGAACATGCTTCTCAGAGTCTTCCTTGCTATAACAGGAAGAGCAAACGTGACTCTGCATTTGGAGTTTGAATCCGATGATATAGATTGCAAGATCAATGGGTACCTTCTTCCCAGTCATGTGTTTCTGCTTCTTTCCACGTGTTGGGCTATGTCGTGGGATTGTAGAAATTTGAAAGGGAAAGGAAATCTCAGTCTTCCAAATCTGAATCATTTGGTATTGTCAGCCATCACATCGTGTGCCCAAGTTGAGGGTGGATTTAATGTATGGGATTGTGACATCTCGAGCTTGGAAGTTCAACTTCCTGCAGGGAAGTTTGTTACATGGGTTATGAGTAGGGTGCCATGCCTCCCCGATTGCTTAAGACAGTATTTTCATGCAAGAATGCAAATGGCAGTAACTGCAGGGGATGAACTGGCATCCTCTGATTCCTCCTCTGTTGGAGATATTTCATCAACAGCTGCATGTGATTATATTTTAAGCCAAGGAAGAGCGTGGGCAATTTCTATCACACAGAGAAGTGCAGTAAATGAAGAGATTTCTAGAGCATTTATTAGCAGTGGGGCTGCAATGGATGATAGCCTTCTTTATCGGTCATCCACTCATGGAAGAGGCCTCAACAGATTTTGGTCCAATGTTGAAGGTTACAAAGGTCCATTGCTAATTTTGGTTGCTGCAAGTTCAGGAGATGCTCATGAGGGAAATTCTATTGATAGGAAATGGGTTCTTGGTGCCCTAACAGATCAAGGTCTTGAAAATAAAGATATCTTCTATGGAAACTCTGGATGTTTATATTCTATAAGCCCAGTGTTTCATGTATTTCCACCTACTGGTAAGGAAAAGAATTTTGTTTATAGCCACTTGCATCCTACTGGTAGAGTATACGAATCACATCCAAAGCCGGTAGGAGTTGCATTTGGAGGAACTCCGGGAAATGAGAGAATATTTATAGATGAAGATTTTGCAAAAGTAACTGTTCGCCATCATGCTATTGACAAAACTTACCAGAGTGGTTCCCTCCTTCCAGATCAGGGTTTCCTGCCTATTGAAGCTCGGATTTCAGAAGTTGAAGTTTGGGGACTTGGTGGGAAAGCGGCAAAGGAAGTGCAAAACTCATATAAGAAGAGAGAAGAACTTTTCACTGAGCAAAGACGAAAAGTGGACTTGAAGACATTTGCAAATTGGGAGGATTCACCTGAGAAAATGATGATGGACATGATGTCTGATCCAAACGCTGTTCGAAGAGAAGACCGCTGA 1608 0.4384 MGASNSAGPRVSEEQREAETVAASTGSLPVLQKAFSKLANPETNAVPLENLQQCFSFGGEGRSNYAGNVPDLFPVLLDHLGSSLIDQFFVPDKGGISWVEFVRGYNKCCARVSASILLNMLLRVFLAITGRANVTLHLEFESDDIDCKINGYLLPSHVFLLLSTCWAMSWDCRNLKGKGNLSLPNLNHLVLSAITSCAQVEGGFNVWDCDISSLEVQLPAGKFVTWVMSRVPCLPDCLRQYFHARMQMAVTAGDELASSDSSSVGDISSTAACDYILSQGRAWAISITQRSAVNEEISRAFISSGAAMDDSLLYRSSTHGRGLNRFWSNVEGYKGPLLILVAASSGDAHEGNSIDRKWVLGALTDQGLENKDIFYGNSGCLYSISPVFHVFPPTGKEKNFVYSHLHPTGRVYESHPKPVGVAFGGTPGNERIFIDEDFAKVTVRHHAIDKTYQSGSLLPDQGFLPIEARISEVEVWGLGGKAAKEVQNSYKKREELFTEQRRKVDLKTFANWEDSPEKMMMDMMSDPNAVRREDR. 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g01997 535 PANTHER NUCLEOLAR PROTEIN 7/ESTROGEN RECEPTOR COACTIVATOR-RELATED 309 478 - -
Seca4g01997 535 ProSiteProfiles TLDc domain profile. 283 479 IPR006571 -
Seca4g01997 535 Pfam TLD 312 479 IPR006571 -
Seca4g01997 535 SMART 109ultra 290 479 IPR006571 -
Seca4g01997 535 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g01997 Seca-Chr4 34002630 34007066 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g01997 - - gmx:100786867 924.85