Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g01952 ATGGCGTTGTTCTCTGTTTCTCTCTGCTACACCTCCTTCCCTTCCCTTCCTCACTTGCCACAAAATTTGAGAAGGAAACATGCCCATTTACCATTGATTCGTGCAGTTCAAGCTGGTGAATCAGCCAGCCCGCAGAATAAGAGTGAAGGCTCCTCTGATACTCAGTCTTCAACTGCTGCTCCTAAGACTCCCAAGAAACCTGTCTATTCCATGAAGAAAGGTCAGATTGTGAGGGTGGACAAGGAGAAATATCTCAATAGCATCAATTATCTTTCTGTTGGGCACCCACCTTACTACAAAGGATTAGACTACATTTATGAAGACCGTGGTGAGGTCCTGGATATGCGCATATTTGAAACAGGGGAGCATGCACTTATTGCATGGGTAGGGGTCCCCACTGCTCCAGCTTGGCTTCCTACATACATGCTTATCAAGTCAGAGAAGCTCGATTATGAGAGGCTATGA 465 0.4602 MALFSVSLCYTSFPSLPHLPQNLRRKHAHLPLIRAVQAGESASPQNKSEGSSDTQSSTAAPKTPKKPVYSMKKGQIVRVDKEKYLNSINYLSVGHPPYYKGLDYIYEDRGEVLDMRIFETGEHALIAWVGVPTAPAWLPTYMLIKSEKLDYERL. 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g01952 154 MobiDBLite consensus disorder prediction 39 63 - -
Seca4g01952 154 PANTHER NAD(P)H-QUINONE OXIDOREDUCTASE SUBUNIT O, CHLOROPLASTIC 1 154 - -
Seca4g01952 154 Pfam Cyanobacterial and plant NDH-1 subunit O 71 145 IPR020905 GO:0005886|GO:0016655
Seca4g01952 154 MobiDBLite consensus disorder prediction 38 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g01952 Seca-Chr4 32757297 32759213 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g01952 - - gmx:100500669 249.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g01952 4 32757297 32759213 Seca4g01952 4 32757297 32759213 ECH