Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g01901 ATGAACGATTTCGATGGTCTCTTAGGTACTGATTACGGGTTCAAACCCCGAGGCAAATCGGCGCCAATGGCAGCATCCAAGGGATCTTCCAATTTCAACAACACTTCTTCCCTCAACTTCGATTTAGGTTCCCGATCCACTTCCTCTTCTAATCAACACTCCTCCGCTGCTGGCTTCGACGATCTCTTCGGTGCTTCCTCGCCCTTCAATTCGTCCTCCACCGATTTCGCCGCTTCCAAGTCTGTCAACTTGCCTCCCGTCTACGACAAACCTATCTATGACGACGACATTTTTGACGGCGTCCCCGGCCTCAAGAGCAGCTCCTCCTCCAAGGTCCCTTACGACGACGTTTTCGCTTCTCCGGCAGGGAACGCCGCCGCCTTCGACGATCTTCTTGGCGGATTCAATCAATCCAAGAGATCGGAAAAGGATGACAAAGGTGTCGCTGATTTTGACGATTTGATCCCTGGATTCGGGAGCAGTAAGCATTCCAGTGAAAGGCCTGCTCCTGATAGTAGTTTCTCATCAGAATCTAATGTCGGTGCATCTAAAACAGCCTCAGGTGCTACAGAAGACCCTTTTAAAGTCTTTGAATCAGCCTCAGCTCCAATGGATTCATCTTCAGGCCACTTTACCGACCCATTGGATGAAATTAGTAAATTTACTAGTTCTAGAAACACAAAAGTTGATAGTTCGTCAAATTCTAATGGTGTAGTATATGATGATACTGATCCCTTTGATGGGCTTGGAAATTCTATACCAGCATTCTCATCAGAGAGAAATAGCAGGAACGGTAGCAGTTCCCCAACACCTAGGTCAGACACAAATTCAAGTTGGACCAGAGATAAAGAATCAATTGAGAAATCGTCTGTGAAGAGTCCTGGCAGACAAACACAAAACAAGATTCCTGTTAAAAATGATCAGGAGTTTCATCAGGCTCCATATGACATGCCTACATATTCATCTGATTCGAATAAACCAGTTGGCCAAAGGTCTACTTCCCCTTCGTACGATAATGATGGTTTTACACAGGTCAATACTCAGGCAGATATGTCTCCAAAATATGAAGAAAAGTTGGACTCAAATGATGATATATGGTTGACAGTATCAGAGATTCCTCTTTTTACACAACCAACTGCTGCTCCACCACCTTCAAGACCGCCTCCTCCCCGACCAGTACATATCCCCAAGTCAGGAACAGGTTTACCAGCTTCTGCCAATGCCAGAAAGAAGGATAATGAATTTTCTTCTTTCCCGAGTTCCACTCGATTTTCTCAGGGTCATAAATCTGCTCCTGCTGCAGCCAAGTTATCTTCTGCATCTCAGTTTGATGAACTTGAAGATTTTGCCATGGGCAGCCAGGGCAGGAGTCGTGGTAATGATGATGAACGTAGAAATGGTCTTCCTGATGAAGAATTAGAGATGAACTCAGCTGCTGCAGCTATGAAGGAGGCTATGGATAGAGCTGAAGCTAAATTTAGGCATGCAAAAGAAGTTAGAGAGAGAGAGAATACGAAAGCTGCTAGAAGCAAAGAACCTGTGCAATTGGAAAAAAATGATAGAGCTGTGCCAGAGGAGAGGGAGAAACAGGAATGGTTAGACCATGAGCGGCAGCAAAAGGAGAGGGAGGAAAAGGAGCAAAGGAGAATTGAGAGGGAAAGGGAGGAGAAAGAAAGAGAACGGCAGAGACTTGAGAGGGAAAGAGAAAAGGCAAGACAGGCTGTGGAAAGAGCTACTAGAGAAGCACGTGAAAGAGCAGCTGCTGAAGCTCGCCAAAGAGCTGAGAGGGCTGCTGTTGAGAAAGCTAATGCAGAAGCTAGAGAGCGTGCTGAAAGGGCTGCAGTTCAGAGGGCACAAGCTGAAGCCCGTGAAAGGGCTGCTGCGGAGGCGAAGGAAAGAGCTGAAAAGGCTGCTGCGGAGGCAAAGGAGAGGGAAAGAGCTGCAGCTGAAGCACGAAGTAAAGCTGAACGTGCTGCTGTAGAAAGGGCTGCTGCAGAGGCCCGAGAAAGAGCTGCTGCAGAGGCCAGAGAAAGAGCTGCAGCAGCTGCAAGGATGAACCAACAAAAGAATGAAAATGATCTTGAATCATTCTTCAGCATGGGTGCACGAGCAAACAATGCTCCAAGGCCACCTAGGGCTAGCTCTTCAGATTCTGCATTTGATGCCCAATTTCAGCCTGATGTAACCCGGAAATCTACAAGTGTGTCTTCAAACATGAAGAAAGCATCATCGTCAACTAATATTGTTGATGATCTTTCCTCAATTTTTGGAGCTTCTCCATCATCTGGAGAATTTCAGGAAGTTGACGGGGAAAGTGAAGAAAGACGAAAAGCCAGGTTGGAACGCCACCAGAGGGCTCAGGAGCGTGCGGCAAAAGCATTGGCTGAGAAGAATCAACGAGACCTACAAACTCAAAGAGAGCAAGCTGAGAGACATAGGCTTGCTGAAACACTGGATTTTGAAATTAAGCGCTGGGCTGCAGGAAAAGAAGGGAATTTGCGTGCTTTGCTCTCCACCTTACAATATGTGCTATGGCCTGAATGTGGTTGGCAGCCAGTTTCTTTGACTGATTTGATTACAGCTGCTGCTGTTAAAAAGGCTTATAGGAAAGCTACATTGTGCATTCATCCTGATAAAGTGCAGCAGAAAGGTGCCACTCTTCAACAGAAATATGTTGCAGAGAAGGTGTTTGATCTACTCAAGGAAGCATGGAATAAATTCAACTCAGAGGAGCTTTTCTAA 2742 0.4624 MNDFDGLLGTDYGFKPRGKSAPMAASKGSSNFNNTSSLNFDLGSRSTSSSNQHSSAAGFDDLFGASSPFNSSSTDFAASKSVNLPPVYDKPIYDDDIFDGVPGLKSSSSSKVPYDDVFASPAGNAAAFDDLLGGFNQSKRSEKDDKGVADFDDLIPGFGSSKHSSERPAPDSSFSSESNVGASKTASGATEDPFKVFESASAPMDSSSGHFTDPLDEISKFTSSRNTKVDSSSNSNGVVYDDTDPFDGLGNSIPAFSSERNSRNGSSSPTPRSDTNSSWTRDKESIEKSSVKSPGRQTQNKIPVKNDQEFHQAPYDMPTYSSDSNKPVGQRSTSPSYDNDGFTQVNTQADMSPKYEEKLDSNDDIWLTVSEIPLFTQPTAAPPPSRPPPPRPVHIPKSGTGLPASANARKKDNEFSSFPSSTRFSQGHKSAPAAAKLSSASQFDELEDFAMGSQGRSRGNDDERRNGLPDEELEMNSAAAAMKEAMDRAEAKFRHAKEVRERENTKAARSKEPVQLEKNDRAVPEEREKQEWLDHERQQKEREEKEQRRIEREREEKERERQRLEREREKARQAVERATREARERAAAEARQRAERAAVEKANAEARERAERAAVQRAQAEARERAAAEAKERAEKAAAEAKERERAAAEARSKAERAAVERAAAEARERAAAEARERAAAAARMNQQKNENDLESFFSMGARANNAPRPPRASSSDSAFDAQFQPDVTRKSTSVSSNMKKASSSTNIVDDLSSIFGASPSSGEFQEVDGESEERRKARLERHQRAQERAAKALAEKNQRDLQTQREQAERHRLAETLDFEIKRWAAGKEGNLRALLSTLQYVLWPECGWQPVSLTDLITAAAVKKAYRKATLCIHPDKVQQKGATLQQKYVAEKVFDLLKEAWNKFNSEELF. 914
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g01901 913 MobiDBLite consensus disorder prediction 217 240 - -
Seca4g01901 913 SUPERFAMILY Chaperone J-domain 743 911 IPR036869 -
Seca4g01901 913 CDD DnaJ 860 905 IPR001623 -
Seca4g01901 913 MobiDBLite consensus disorder prediction 768 786 - -
Seca4g01901 913 MobiDBLite consensus disorder prediction 410 428 - -
Seca4g01901 913 Coils Coil 777 812 - -
Seca4g01901 913 MobiDBLite consensus disorder prediction 315 351 - -
Seca4g01901 913 FunFam Auxilin-related protein 1 783 912 - -
Seca4g01901 913 MobiDBLite consensus disorder prediction 136 151 - -
Seca4g01901 913 MobiDBLite consensus disorder prediction 1 34 - -
Seca4g01901 913 MobiDBLite consensus disorder prediction 291 306 - -
Seca4g01901 913 PANTHER AUXILIN/CYCLIN G-ASSOCIATED KINASE-RELATED 611 911 - -
Seca4g01901 913 MobiDBLite consensus disorder prediction 165 186 - -
Seca4g01901 913 MobiDBLite consensus disorder prediction 373 786 - -
Seca4g01901 913 MobiDBLite consensus disorder prediction 135 359 - -
Seca4g01901 913 ProSiteProfiles dnaJ domain profile. 848 912 IPR001623 -
Seca4g01901 913 MobiDBLite consensus disorder prediction 485 677 - -
Seca4g01901 913 MobiDBLite consensus disorder prediction 254 276 - -
Seca4g01901 913 MobiDBLite consensus disorder prediction 709 761 - -
Seca4g01901 913 MobiDBLite consensus disorder prediction 377 396 - -
Seca4g01901 913 MobiDBLite consensus disorder prediction 457 471 - -
Seca4g01901 913 Coils Coil 533 692 - -
Seca4g01901 913 Gene3D DnaJ domain 780 912 IPR036869 -
Seca4g01901 913 Coils Coil 479 506 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g01901 Seca-Chr4 31960184 31968495 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g01901 - - tpra:123916386 831.632