Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g01881 ATGGATCGAAGGAGTTGGCTATGGCGCAGGAAGTCATCTGAGAAAAGTCCTGGTGAAACTGAGAGTTCTGGATCAATGTCATCTCATTCAGAAAGATTATCTGATGATCAGGTATATCCCACCCAAACCACCCCATCTGCAGAATTCACGCTTAGGGCTGCACCAAATGAAGAAGAAGCTACTGATGTGAAGACTTTAACAGAAAAATTATCCACTGCTCTCTTAAACATTAGTGTCAAAGAAGACTTGATAAAGCAGCATGCTAAAGTTGCTGAAGAAGCTGTCTCAGGCTGGGAGAAGGCTGAAAATGAAGTGTTGACTTTAAAACAACAACTTGACACTGCAAAACAGAAGAACACGGTTCTTGAAGACCAAGTTAGTAACCTCAATGTGGCACTTAAGGAGTGTATGACACAACTTCTACAAGCTAGAGAAGAGCAAGAGCAAAAGATCCATGAATCTGTTGAGCTCAAGGCTCAACATCAAACAGCTAAAGCAGATGCTGCTGCATCAGTCAGTTCTGATCTTCACCAAAGACTTGAGGATGTAGAGAGAGAGAATTCAAGTCTTAAAATTGAACTACAATCTCGACTTGAGGAACTAGAATTGAGGACCATTGAGAGGGATTTGAGTACCCAAGCTGCTGAAACAGCCAGCAAGCAACATTTGGAGAGTATAAAAAAAGTGGCCAAACTTGAAGCTGAGTGCCATAGATTGAAAGCCATGGCTCGCAAAACATTCTCAGCTAATGATCACAGGTCTATGACTGCCTCTTCAGTTTATGTTGAGTCTTTCACAGATAGCATGTCAGATAGTGGAGAGAGACTACAGGCAGTTGAAAGTGATATGCACAAATTAGGAGGCTGGGAGATGAATGAAGGTGAGCCAAGCCATTATGACTCATGGCCATCTGGTTTAATTACAGAACTGAATCAATTTAAGAATGAAAAATCTAAAGGAAAAAATCTTATGGTCTTTTCAACTGAAATCAATCTGATGGATGATTTCCTTGAAATGGAAAGGCTTGCTGCATTGCCAGATACAGAAAGTGCAAGCAGTTTTCCTGTAATAGGTACTGCATCAGACCAACCTAATGTTGGCCAGGCCACAGACACAATGTATGCTGGAGTGGAAGCTTTGGTTCAAAAGAATTCTTCATTGGAAAAGAAGCTAGAGAAAATGGAAGTAGATAAACTTGAGCTAGAGATGGACTTAACCGAGTGCCAAAACCAGCTTGAGGCATCACACAGTCGGATAAAGGAACTGGAGTTGGAGGTTGTAGAGCTTCAAACTCAGTTGGCTCTTGCAAATGAATTAAATGAAGAAGCATATGAAGAACTACAAGCAACTCAAGCAAAGAATGAGATAGGTGAGTCAAAACTCAGAGTTGCTCAAACTGAGGCAGAAGAATTGATTTCAAAGATTTGTTCATTGGAGGAAGAGATTGAGAAAGAGCAAGCCTTGTCTGCTGAGAATTTGGCTAAGTGTGAGAAGTTGGAGGATGAGCTTTTGAGAATGAAGCATGAAACTCAATTCCTGCAAGACACTGAGATACTGCATAGGGAAGATGTTAATAGCGAGTTAAAGTTAAAGCAGGAGAAGGAACTAGCATTGGCTACTAATAGATTTGCTGAGTGCCGGAAAACCATTGAATCTCTTGGATTACAGTTAAAGTCCCTTGCAACATTGGAAGACTTCCTACTTGATTCAGATTCAGAGAACCCTATGGAGTTAACTTGTGAAGTTACACCAAGTCCTCAAAATGGTGGTGAGCAGTTGAAATTAGATAAGAGTGATTTGAGATTGCCCAAAAGAGGTTCTGAATCATCAGTTTCAGTAAACACATCTAATAGTTTTGCTAGGTTCTATCCTAGAAGCAAGGGTGTAAGCAGAACAGGAAGTCACTGA 1908 0.4078 MDRRSWLWRRKSSEKSPGETESSGSMSSHSERLSDDQVYPTQTTPSAEFTLRAAPNEEEATDVKTLTEKLSTALLNISVKEDLIKQHAKVAEEAVSGWEKAENEVLTLKQQLDTAKQKNTVLEDQVSNLNVALKECMTQLLQAREEQEQKIHESVELKAQHQTAKADAAASVSSDLHQRLEDVERENSSLKIELQSRLEELELRTIERDLSTQAAETASKQHLESIKKVAKLEAECHRLKAMARKTFSANDHRSMTASSVYVESFTDSMSDSGERLQAVESDMHKLGGWEMNEGEPSHYDSWPSGLITELNQFKNEKSKGKNLMVFSTEINLMDDFLEMERLAALPDTESASSFPVIGTASDQPNVGQATDTMYAGVEALVQKNSSLEKKLEKMEVDKLELEMDLTECQNQLEASHSRIKELELEVVELQTQLALANELNEEAYEELQATQAKNEIGESKLRVAQTEAEELISKICSLEEEIEKEQALSAENLAKCEKLEDELLRMKHETQFLQDTEILHREDVNSELKLKQEKELALATNRFAECRKTIESLGLQLKSLATLEDFLLDSDSENPMELTCEVTPSPQNGGEQLKLDKSDLRLPKRGSESSVSVNTSNSFARFYPRSKGVSRTGSH. 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g01881 635 Coils Coil 482 516 - -
Seca4g01881 635 Coils Coil 173 200 - -
Seca4g01881 635 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 1 618 - -
Seca4g01881 635 MobiDBLite consensus disorder prediction 1 17 - -
Seca4g01881 635 Coils Coil 98 146 - -
Seca4g01881 635 MobiDBLite consensus disorder prediction 581 614 - -
Seca4g01881 635 Pfam Filament-like plant protein, long coiled-coil 293 351 IPR008587 -
Seca4g01881 635 Pfam Filament-like plant protein, long coiled-coil 381 562 IPR008587 -
Seca4g01881 635 Pfam Filament-like plant protein, long coiled-coil 165 245 IPR008587 -
Seca4g01881 635 Pfam Filament-like plant protein, long coiled-coil 80 161 IPR008587 -
Seca4g01881 635 MobiDBLite consensus disorder prediction 18 50 - -
Seca4g01881 635 Coils Coil 377 469 - -
Seca4g01881 635 MobiDBLite consensus disorder prediction 1 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g01881 Seca-Chr4 31568289 31571799 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g01881 - - gmx:100810372 851.277