Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g01859 ATGGAAGGGCCTTCCAATTCAAAGCTTGAATTCTTGGTGTGGTTCTCTCAAGTTATGGGGAGTCTTTGCTCCCGGTCCGCGGAGGTTGACCCCGTCTTTCCCAACACTGATGCTCCTGCTTCTGCTAACCGTAGCAACAAGGACACTGATTTCACGACGGCACCTCAACCACGCGAAAAAATGGACAGGAATCTTCAAGAACCTTCTGGAACCAAAGCGAACGATGATTTCTACGACGGAATCCCACGCTTTGCTGAAGATTCTTTTCCTCACAAAACTAGGGCAAAGCAGGCTACTGTTGCCAAGGTTTCGGAGGTGAGTTCACGCCTCGGCAGAGCTGGGATTGGGAAAGCAGTGGAGGTGTTGGATACTCTTGGGAGTAGCGTCACAAATTTAAATGCTGGAAGTGGATTCGTTTCTGGTGCTGCAATTAAGGGGAATGAAATTTCCATCTTGGCATTTGAGGTTGCAAACACTATTGTCAAAGGTTTTAATCTTCTGCAATCACTTTCTGCAAAAAGTATTAGGCATTTAAAAGAAGAGGTGCTTCTTTCAGAGGCTGTGCAAGATTTAGTTTCGAAGGATAAAGATGAACTTCTTAGGATTGTTGCTGCAGACAAGAGGCAGGAGTTGAAAGTTTTTTCTGATGAGGTGATTCGTTTTGGAAATCGATCAAAGGATCCTCAGTGGCACAATTTAGAACGTTACTTTGAGAAGATTAGCAAAGAATTAAATGCCCAAATAATCTCAAGAGATGAGGCAGAATCAATGATGGAAGAATTGATGACTTTGGTTCAATTCACAGCTGAATTGTACCATGAACTTCATGCTTTGGATAGATTTGAACAAGATGTTCAGCGTAAGAGTGAAGAAGAGGATCAAAGAGGTGATAGCCTTGTATTCTTGAAGGCTGAAGTTAAAAGTATAAAGAAGCAAATTAAACATTTAAAGAAAAAATCACTCTGGTCAAGAAGTTTGGAGGAGGTAACTTCAGATTGCTTCTTGATGTGTATCTCATCCCCAGTATCCTCCTCCCTATTTGTTTTATCCTCTGTGACTTTTATTGTGTCTGATCCACATATAATGCCGAAGATAGTTATTGAGAAGCTTGTAGACATTGTCCATTTTTTGCATTTGGAGATAAGCAATGCCTTTGGCAGTGCAGATGGCCACAAACTAATAATTGGACACATGAGCAATCGCCAAAGATTGGGCCCTGCAGGCCTTGCTTTGCATTATGCAAATATAGTGCTTCAAATTGATACTCTTGTAGCTAGATCCAGTTCAATGCCTGCAAATACAAGGGATGCATTATATCAAAGCTTGCCTCCTAATATAAAATTAGCTCTTCGCTCCAAATTACCATCCTTTCATGTTGTAGAAGAGCTAACTGTAGCAGATATCAAAGATAAGATGGAGGAAACATTACATTGGTTGGTTCCGATTGCCACAAACACATCCAAAGCACATCATGGCTTTGGTTGGGTAGGGGAGTGGGCAAACACAGGCTCTGAGGTGAATAGGAAGACTTTGCAGGCTGGTATAATGCGGATTGAGACATTCCACCATGCAGATAAAGACAAAGTAGAATATTATATTCTTCAACTTCTTTTATGGCTTCACCGCTTGGCCATCAAAATTAAGGCTGGTAGTGATACTGGCAAAGTGAGGTCTGCCATCAAGTCCTCTGTTGGCCCTCCCTTGGAAAAGTCAGACAAACAGTCTACGAATGCCCTTTTACCAATGTTAACAATTGATGAGCAAAACATGCTACAGGATGTAAGTAAGAAAACACAAATTAGAGGGATCAGTAAAAGCTTGGACTTTGACAATCTGGAGACTAGATTGAGGGAGAACTATGCACTGACCAAGAGTAGCAGTCTTTCGTCAAGTAAAAGCAAAGAAATATCTTTTAATAGGATTTTGTCTAAGCTTCCAGTGATTGATTTTGATATCGACAGAGAAAGAACATTGAACATGATCGACAGACTAGATGTGATCAGATAA 2007 0.4111 MEGPSNSKLEFLVWFSQVMGSLCSRSAEVDPVFPNTDAPASANRSNKDTDFTTAPQPREKMDRNLQEPSGTKANDDFYDGIPRFAEDSFPHKTRAKQATVAKVSEVSSRLGRAGIGKAVEVLDTLGSSVTNLNAGSGFVSGAAIKGNEISILAFEVANTIVKGFNLLQSLSAKSIRHLKEEVLLSEAVQDLVSKDKDELLRIVAADKRQELKVFSDEVIRFGNRSKDPQWHNLERYFEKISKELNAQIISRDEAESMMEELMTLVQFTAELYHELHALDRFEQDVQRKSEEEDQRGDSLVFLKAEVKSIKKQIKHLKKKSLWSRSLEEVTSDCFLMCISSPVSSSLFVLSSVTFIVSDPHIMPKIVIEKLVDIVHFLHLEISNAFGSADGHKLIIGHMSNRQRLGPAGLALHYANIVLQIDTLVARSSSMPANTRDALYQSLPPNIKLALRSKLPSFHVVEELTVADIKDKMEETLHWLVPIATNTSKAHHGFGWVGEWANTGSEVNRKTLQAGIMRIETFHHADKDKVEYYILQLLLWLHRLAIKIKAGSDTGKVRSAIKSSVGPPLEKSDKQSTNALLPMLTIDEQNMLQDVSKKTQIRGISKSLDFDNLETRLRENYALTKSSSLSSSKSKEISFNRILSKLPVIDFDIDRERTLNMIDRLDVIR. 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g01859 668 Pfam Domain of unknown function (DUF3475) 151 207 IPR021864 GO:0045927
Seca4g01859 668 Pfam Protein of unknown function (DUF668) 403 487 IPR007700 GO:0045927
Seca4g01859 668 Coils Coil 299 319 - -
Seca4g01859 668 MobiDBLite consensus disorder prediction 34 77 - -
Seca4g01859 668 MobiDBLite consensus disorder prediction 38 52 - -
Seca4g01859 668 PANTHER OS01G0873900 PROTEIN 19 665 IPR045021 GO:0045927
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g01859 Seca-Chr4 31133030 31144981 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g01859 - - gmx:100779607 888.256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g01859 4 31133030 31144981 Seca4g01859 4 31133030 31144981 ECH