Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g01853 ATGGTGGCCGTGAAGGACATGTACCCTCGATTGCCCAATGCTGAGATCATGTCTCCTGTGGCTTCAGTGGTGATTTCAACGGACAAGTTGAGACAGAGGCTTTTGCAAGAGGGTGTAAGTGAGGTTGCTATTCGTGAGAGTGAGGAAATCATGAGAGCAGAGCTTTTACAATTGCATAAGCATATTGTGGCCCTCAAGCACAAGCAGTTACTACTCATGGACACCCTGCGCCAATTAGAGACGGAGAAGGTTGACCTGGAAAACACACTTCTTGAAGACCAAAGGCAATCAAAGGTCGATGAAGGGGATCCTTATCTCTCATCGCAAGAAAAGTACAGTGATGGAAGTGCTAGTGATTATTCTGATGAGCATGATAGGCATGATGATCACTTTGATGATGAGGATGATGCATTCTTTGATACATGTGAAATTCTTTCAACAAGTTCTGTTTCTGAATGTGAGGGGGACAGTCCAATTGGCAAAGGTGATGGAAAGTCTCCCATTGGATCTGTTGGATTTAACTATCCTCTTGTCCAGCGACGAAAGAAGTTGCCTGATCCTGTTGAGAAAGAGAATGGAGTCAGTCTATGGTCAATAATAAAAGATAACATCGGGAAGGATCTTACAAAAGTTTGTCTTCCAGTTTACTTTAATGAGCCTATCTCCTCATTGCAGAAATGTTTTGAAGATCTTGAGTACTCTTACCTTCTAGACCAGGCTAATGAATGGGGTAAAATGGGTGACAGACTAATGAGGATGCTACATGTGGCTGCATTTGCAATTTCAGGATATGCTAGCACTAATGGTAGAACTTGCAAACCATTTAATCCACTGTTGGGTGAGACATATGAGGCAGATTATCCAGACAAAGGCCTTCGCTTTATCTCTGAGAAGGTCAGTCATCACCCCATGGTTGTTGCATGTCATTGTGAGGGCACTGGCTGGAAATTTTGGGGTGACAGCAACTTGAAAAGTAAATTTTGGGGTCGTTCAATTCAGGTTGATCCCGTTGGTGTATTGACTTTGGAGTTTGATGATGGAGAAGTCTTTCATTGGAGCAAGGTAACCACATCCATTTACAACCTCATTTTAGGGAAACTCTATTGCGACCATTATGGTACAATGCGGGTAGAGGGGAACCGTGAGATTTCATGTAAGATCAAATTCAAGGAGCAGTCGATCATTGATAGAAACCCTCACCAGATTCACGGCGTAGTGGAAGATAAGAAAGGTAGAACGGTGGCAACTCTATTTGGGAAGTGGGATGAGAGCTTGCATTACGTAATTGGAGGGCCTTCTGGGAAAGGAAAAGGGTCCAATGTGCCATCAAAACCACATCTTTTGTGGAAACGGAACCCGGTCTCCGAGCATCAGACAAGATATAACCTTACACAGTTTGCTTTAACACTAAACGAAATCACACCTGGACTAAAGGAGAAGTTGCCACCAACAGATTCAAGGCTAAGGCCTGATCAAAGAAGTTTGGAGAATGGACAGTATGAAATGGCCAACTCTGAAAAGTTGCGGCTGGAACAAAGACAGCGACAGGCACGGAAGATGCAAGAGAAGGGTTGGAAACCAAGGTGGTTTGCTAAGGAAAAGGGCAGCAATACTTACAGTTATGTTGGTGGATACTGGGAAACTAGGGAAAAAGGGAACTGGGAATCATGTCCTGACATTTTTGGCCAACTCCCAGCTGATAATGATTCTATCCCATCTCCATAA 1725 0.4371 MVAVKDMYPRLPNAEIMSPVASVVISTDKLRQRLLQEGVSEVAIRESEEIMRAELLQLHKHIVALKHKQLLLMDTLRQLETEKVDLENTLLEDQRQSKVDEGDPYLSSQEKYSDGSASDYSDEHDRHDDHFDDEDDAFFDTCEILSTSSVSECEGDSPIGKGDGKSPIGSVGFNYPLVQRRKKLPDPVEKENGVSLWSIIKDNIGKDLTKVCLPVYFNEPISSLQKCFEDLEYSYLLDQANEWGKMGDRLMRMLHVAAFAISGYASTNGRTCKPFNPLLGETYEADYPDKGLRFISEKVSHHPMVVACHCEGTGWKFWGDSNLKSKFWGRSIQVDPVGVLTLEFDDGEVFHWSKVTTSIYNLILGKLYCDHYGTMRVEGNREISCKIKFKEQSIIDRNPHQIHGVVEDKKGRTVATLFGKWDESLHYVIGGPSGKGKGSNVPSKPHLLWKRNPVSEHQTRYNLTQFALTLNEITPGLKEKLPPTDSRLRPDQRSLENGQYEMANSEKLRLEQRQRQARKMQEKGWKPRWFAKEKGSNTYSYVGGYWETREKGNWESCPDIFGQLPADNDSIPSP. 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g01853 574 Coils Coil 500 523 - -
Seca4g01853 574 Gene3D - 281 458 - -
Seca4g01853 574 MobiDBLite consensus disorder prediction 95 131 - -
Seca4g01853 574 MobiDBLite consensus disorder prediction 116 131 - -
Seca4g01853 574 FunFam oxysterol-binding protein-related protein 1D isoform X1 281 453 - -
Seca4g01853 574 Gene3D - 492 556 - -
Seca4g01853 574 SUPERFAMILY Oxysterol-binding protein-like 190 565 IPR037239 -
Seca4g01853 574 Coils Coil 76 96 - -
Seca4g01853 574 Pfam Oxysterol-binding protein 195 550 IPR000648 GO:0008289
Seca4g01853 574 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 23 549 IPR000648 GO:0008289
Seca4g01853 574 FunFam Oxysterol-binding protein-related protein 2A 492 563 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g01853 Seca-Chr4 31049080 31054451 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g01853 K20456 - gmx:100807703 950.273