Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g01848 ATGAGAGCTTCTAACAAATGCTTCTCTTCATCCACTTGTTGGTCTTCTCAGTTTGCACTTCTCTTCTTTACACTGTTATTAACTTCACTAGTTCTTGTTTCTTGTTGGTGTCTCTCTCCAAACTTCTCTTCATTTCTTGTTTCTTGGAGTTTGAGGGGACAACCAAAAACTTACTCTTTGGACATAGAAAGAAAAGGAGCTTCAACATTATATGATGATGAGGGAGAGGCTCCATCACCAACTGCATTATTTCCTTCAGATCACACACAACAAACACCACAAGCTCTGAATGGTGAAAAGCTTGACACAAACTTTAAGCATAAAGGCACAAACAAAGCGAACCTTAGAGCTCATAAGTACAGCAAGTTGAAAAGAATTGAAGCAAGATTAGTTAAAGCACGGGATTCTATCAGAGAAGCTAGCAAAGTTCAAAACTTGACATCAACCCACACAGATCCAGACTATGTTCCTCAAGGCCCAATTTACAGAAATGCCAATGCTTTTCATAGGAGTTACCAAGAGATGGAAAAGGTGTTCAAGATTTTTGTGTATGAGGAAGGGGAGCCACCAATGTTCCACAATGGTCTATGCAAAAGCATATACTCCACAGAGGGAAGATTCATAAATGAAATGGAAAAGGGGAGGTACTATCGTACTTATGATCCAGATGAAGCTTCTGTGTATTTTCTTCCTTTCAGTGTGGTTATGATGGTTGAATATCTCTATGTGCATGGCTCCAATAATTTAACTTCCATTGGCCTTTCTGTGAAAGACTACATACAGATTATATCCCATAAACATCCCTTCTGGAATCCTTGGGCCATGATCATTTCATGCTCTCTTGCCATGATTGGGTAA 858 0.3928 MRASNKCFSSSTCWSSQFALLFFTLLLTSLVLVSCWCLSPNFSSFLVSWSLRGQPKTYSLDIERKGASTLYDDEGEAPSPTALFPSDHTQQTPQALNGEKLDTNFKHKGTNKANLRAHKYSKLKRIEARLVKARDSIREASKVQNLTSTHTDPDYVPQGPIYRNANAFHRSYQEMEKVFKIFVYEEGEPPMFHNGLCKSIYSTEGRFINEMEKGRYYRTYDPDEASVYFLPFSVVMMVEYLYVHGSNNLTSIGLSVKDYIQIISHKHPFWNPWAMIISCSLAMIG. 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g01848 285 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 35 - -
Seca4g01848 285 Pfam Exostosin family 176 271 IPR040911 -
Seca4g01848 285 Coils Coil 123 143 - -
Seca4g01848 285 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 28 271 IPR004263 GO:0006486|GO:0016757
Seca4g01848 285 MobiDBLite consensus disorder prediction 71 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g01848 Seca-Chr4 30785171 30786433 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g01848 - - aprc:113868893 375.941
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g01848 4 30785171 30786433 Seca4g01848 4 30785171 30786433 ECH
Seca12g06379 12 155754018 155758070 Seca4g01848 4 30785171 30786433 PCT