Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g01811 ATGCTTACTTGCCCGGCAGCAGAGCTAGTGGATGGTTCAAAGGTCTTGTATTTTGAACAGGCTTTTTGGAGGAGTCCACAAAAGCCCTTTCGGCAGAGGTTTTTTATGGTGAAAGCTTGTCCAAAAGAGTTGAAATGTGATGTTGAGTTAAGTACATATGCCATTAGAGACATGGAGGAGTACAAGAATTTTTGTGATCGTCCAAAGGATCAGCGTCCGCAGCCAGAAGAAGTCATTGGGGATATTGCAGAACATTTGACAACAATACATCTTAAGCGTTGCCCTCGTGGAAAACGATGCTTATATGAAGGTTCAACCCCACCTGGCGGATTTCCTAATTCATGGAATGGGGCAACCTACTGTACTTCAGAACTTGCAGTTATGAAGAACAATGAGATACATACCTGGGATAGGGGTTATGATGATGATGGAAATCAAGTTTGGGGACAAAAAGAAGGCCCTTACGAGTTCAAGCCTGCACCTACCTCCTGTTTTAATGATATGGTTTCTCCTTTGAATTTTACCCTGCCACCATCCATGGAGAGAAGAATAGAGGGTTCATTTATTTTGCAAGAATGA 579 0.4266 MLTCPAAELVDGSKVLYFEQAFWRSPQKPFRQRFFMVKACPKELKCDVELSTYAIRDMEEYKNFCDRPKDQRPQPEEVIGDIAEHLTTIHLKRCPRGKRCLYEGSTPPGGFPNSWNGATYCTSELAVMKNNEIHTWDRGYDDDGNQVWGQKEGPYEFKPAPTSCFNDMVSPLNFTLPPSMERRIEGSFILQE. 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g01811 192 Pfam CpeT/CpcT family (DUF1001) 1 158 IPR010404 GO:0016829|GO:0017009
Seca4g01811 192 PANTHER CHROMOPHORE LYASE CRL, CHLOROPLASTIC 1 192 IPR010404 GO:0016829|GO:0017009
Seca4g01811 192 Gene3D CpcT/CpeT domain 1 168 IPR038672 -
Seca4g01811 192 CDD CpcT 1 160 IPR010404 GO:0016829|GO:0017009
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g01811 Seca-Chr4 29971535 29975916 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g01811 - - ccaj:109806559 394.045
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g01811 4 29971535 29975916 Seca4g01811 4 29971535 29975916 ECH