Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g01788 ATGGAAGTATCAAAAGTCGTAGTCGCTTGCGTTGCTGATTTAGCCTTCAAGTATACGGAGCGGCTGGCTAAGGATCTTCATCTATTTGCGCAGCATGCAAATCGTAAATCTGTAAATGTGGAAGATGTCATACTTTGTGCACATCGAAATGAACATCTATCTGACTTGTTGAGGACCTTCGCCAATGATTTAAAAGCCAAAGATCCTCAATCTGAGAGGAAGAGAAAGAAAGAAGCCAAAAAGAACGAGAAAACAACCATTTAG 264 0.4053 MEVSKVVVACVADLAFKYTERLAKDLHLFAQHANRKSVNVEDVILCAHRNEHLSDLLRTFANDLKAKDPQSERKRKKEAKKNEKTTI. 88
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g01788 87 PANTHER CORTISTATIN 1 85 - -
Seca4g01788 87 MobiDBLite consensus disorder prediction 66 87 - -
Seca4g01788 87 Gene3D Histone, subunit A 1 84 IPR009072 GO:0046982
Seca4g01788 87 Pfam CENP-S protein 2 53 IPR029003 GO:0071821
Seca4g01788 87 SUPERFAMILY Histone-fold 2 53 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g01788 Seca-Chr4 29475724 29476820 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g01788 K11511 - gmx:100798682 130.954
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g01788 4 29475724 29476820 Seca4g01788 4 29475724 29476820 ECH