Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g01726 ATGGGAGATAGCAAACCCAGATCCTCCATTCTCTTGTTCCTTCTCACTGTTTCAAGTGTGTTCCTTCACCCAACAAGCTATGTTTTTGCAACCGCACAACAACAACAGCAGCAACCCATCAAAACTGTTGTCGTTTTGGTTATGGAGAACCGTTCCTTTGATCACATGCTGGGGTGGATGAAGAAAGCCATCAACCCATTAATCAATGGGGTTACAGGGGATGAATGCAACCCTGTTTCTACTACAAGCCCAAAGAAAGATTCAATTTGCTTCAGTGATGATGCGGAGTTCGTGGATCCGGATCCAGGGCATTCATTTGAGGATGTGTTAAAACAGGTATTTGGTTCTGGTTCCATTCCTTCCATGAATGGATTTGTGGAACAGGCATTGTCAATGTCTCAGAACCTCTCTGAGACCGTAATGAAAGGGTTTAGACCCGAATCTGTGCCTGTTTATGCCTCTTTGGTTCAGGAATTTGCTGTTTTTGATAGGTGGTTTTCTTCAATTCCTGGCCCAACACAACCCAATAGGCTATTTGTGTACTCTGCAACTTCTCATGGTTCAACAAGTCATGTCAAGAGGCAGTTAGCTAAAGGGTATCCACAAAAAACCATATTTGACTCTATGCATGAGAATGACTTAGACTTTGGGATTTATTTTCAAAACATACCCACAACTCTGTTCTATAGAAATCTAAGGAAATTGAAATACATATTCAAATTCCATCAGTATGATTTGAAGTTCAAGAAAGATGCTAGAGATGGGAAACTTCCACCCTTGACTGTGATTGAGCCTAGGTACTTTGACTTGAAGGGATTGCCTGCCAATGATGACCATCCATCTCATGATGTGGCAAATGGGCAAATGCTGGTTAAGGAGGTTTATGAGGCTCTAAGAGCAAGCCCTCAATGGAATGAAACTCTTCTGATCATTACATATGATGAACATGGTGGTTTTTATGATCATGTGAAGACTCCTTTTGTCAACATTCCTAGTCCAGATGGAAACACTGGACCTGCTCCTTATTTCTTCAAGTTTGATAGGTTAGGCGTTCGGGTGCCGACTATTATGATCTCTCCTTGGATCAAGAAAGGGACTGTGATAAGTAGCCCAAAAGGACCAGCTGAAAACTCTGAGTTTGAGCACTCTTCTATTCCTGCCACTATAAAGAAGATATTCAACCTTTCCTCCAACTTTTTGACTCATAGAGATGCATGGGCTGGGACATTTGAGCATGTTGTTGGAGATTTAAGTGCACCCAGAACAGATTGCCCAGTGACTTTGCCGGACGTGACACCTCTAAGGAGCACTGAAGCAAAAGAAAATGCTGGCCTCTCTCAGTTTCAGAGTGAGGTAGTTCAGTTGGCAGCTGTTCTCAATGGAGATCACTTCCTGAGCAGTTTTCCAGATGAAATGAGCAAAAAGATGAGTGTGAAGGAAGCTCATGACTACGTGCGGGGAGCTGTTTCAAGATTCATAAGAGCAAGCAAAGAAGCCATCAAATTGGGGGCTGATGAGTCTGCTATTGTGGATATGAGATCGTCTCTCACTACCAGATCTTCAACTCACAATTAA 1575 0.4267 MGDSKPRSSILLFLLTVSSVFLHPTSYVFATAQQQQQQPIKTVVVLVMENRSFDHMLGWMKKAINPLINGVTGDECNPVSTTSPKKDSICFSDDAEFVDPDPGHSFEDVLKQVFGSGSIPSMNGFVEQALSMSQNLSETVMKGFRPESVPVYASLVQEFAVFDRWFSSIPGPTQPNRLFVYSATSHGSTSHVKRQLAKGYPQKTIFDSMHENDLDFGIYFQNIPTTLFYRNLRKLKYIFKFHQYDLKFKKDARDGKLPPLTVIEPRYFDLKGLPANDDHPSHDVANGQMLVKEVYEALRASPQWNETLLIITYDEHGGFYDHVKTPFVNIPSPDGNTGPAPYFFKFDRLGVRVPTIMISPWIKKGTVISSPKGPAENSEFEHSSIPATIKKIFNLSSNFLTHRDAWAGTFEHVVGDLSAPRTDCPVTLPDVTPLRSTEAKENAGLSQFQSEVVQLAAVLNGDHFLSSFPDEMSKKMSVKEAHDYVRGAVSRFIRASKEAIKLGADESAIVDMRSSLTTRSSTHN. 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g01726 524 Gene3D Alkaline Phosphatase, subunit A 270 443 IPR017850 -
Seca4g01726 524 Gene3D Alkaline Phosphatase, subunit A 30 201 IPR017850 -
Seca4g01726 524 Pfam Phosphoesterase family 40 395 IPR007312 GO:0016788
Seca4g01726 524 FunFam non-specific phospholipase C6 30 202 - -
Seca4g01726 524 FunFam Non-specific phospholipase C1 256 443 - -
Seca4g01726 524 PANTHER NON-SPECIFIC PHOSPHOLIPASE C4-RELATED 19 495 IPR007312 GO:0016788
Seca4g01726 524 SUPERFAMILY Alkaline phosphatase-like 282 371 IPR017850 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g01726 Seca-Chr4 27949902 27953502 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g01726 8 519 Acyl Lipid Metabolism Gene Families AT3G48610 79.304 0.0 855
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g01726 K01114 - gmx:100786332 949.118