Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g01706 ATGCCAGTGGATGGATCAGTTAGTTTAGCTGGTCACTCGAGCATATGGCCATATGTGATAACAAAAAGATGTGAAGGGAATATGTTCGCAGAGTTAAGAGACAGATTATCATGGGAAGATACAACAAACTTGGCCTCCTTTTTGGGAGAACAGTTGCGCCACCTTCATCTTTTGCCACATCCACCTTTAAATATTTCATTTTTCTCTGATATTGAACATGAATTAAGCTTGTCTGAGGTTAATGGTTGTATTGCAACTTTTAATGGTATAGCAAATACCGCAGCAGAATGGAGAATCTTCACCAGAACCTTAACAAAGATGAGGAAGGATGTCTCAAGCCGTTTGACCAAGTGGGGAGATCCAATTCCTAGCAAACTGATAGAGAAAATTGATGAATATATGCCACCTGATTTTGCTGAGCTGCTAAATATAACTGAGAATTTCGCAAGCGGTGCTTGTAAACCTTGCTCCTGGATACACACTGACATTATGGATGATAACATTTACATGGGACCATCATCAGTTTGCTCTACCTCCAGTGGGACTGAAGTTGCTGCCCTGGTGGGCAATGGTTTGTCGAGTGACTATGAAGAAGTGAAATCCTGGTGTCCTAGTCACATTCTTGATTTCAGTCATCTTTCTATTGGGGATCCTATTTTTGATTTGATACCAATTCATTTAGATGTGTTTAGAGGTGATTTGAATCTTCTTAAGCGAGTTTTAGAAAGTTACAAACTTCCTTTCGCGAGTAACTTATCAAAGGATGAGTCAACAGAGAGTGGTCAGAAGTTTAGCCGACTTTCATATGTTGCCATGTGCTATTGTATTTTGCATGATTACAATGTCTTGGGAGCTATTTTTAGCATATGGGAAGAACTGAGATCAGCAAAGTCATGGGAAGAAGTTGAGCTGAAAGTGTGGGGGGAGTTGAACAATTACAAAGGCTTTCCTTGA 954 0.4004 MPVDGSVSLAGHSSIWPYVITKRCEGNMFAELRDRLSWEDTTNLASFLGEQLRHLHLLPHPPLNISFFSDIEHELSLSEVNGCIATFNGIANTAAEWRIFTRTLTKMRKDVSSRLTKWGDPIPSKLIEKIDEYMPPDFAELLNITENFASGACKPCSWIHTDIMDDNIYMGPSSVCSTSSGTEVAALVGNGLSSDYEEVKSWCPSHILDFSHLSIGDPIFDLIPIHLDVFRGDLNLLKRVLESYKLPFASNLSKDESTESGQKFSRLSYVAMCYCILHDYNVLGAIFSIWEELRSAKSWEEVELKVWGELNNYKGFP. 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g01706 317 PIRSF Hygromycin-B_kin 87 188 IPR016259 -
Seca4g01706 317 PIRSF Hygromycin-B_kin 4 90 IPR016259 -
Seca4g01706 317 PIRSF Hygromycin-B_kin 186 309 IPR016259 -
Seca4g01706 317 SUPERFAMILY Protein kinase-like (PK-like) 16 247 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g01706 Seca-Chr4 27727018 27731078 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g01706 4 313 Glycosyltransferase AT1G78280 48.896 1.23e-90 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g01706 - - gmx:100792541 530.406
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g01706 4 27727018 27731078 Seca4g01706 4 27727018 27731078 ECH