Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g01691 ATGTTTCTTCATGGCTTAGCTGTATTTCAGTTATTCTTAGAAGTTAGAACTTTTCTTTCTCAGATTCTTGGCAGGTTCAACCGAGCTCGGGCCGCACGATTGACGCTCCCTCACTTTGTGTGCCAAACGCCTCTGTTCATGCCAGTAGGCACACAAGGAACAATCAAAGGATTGACAACTAGTCAGCTTGAGGAAATTGGTTGCCAAATAATACTTGGAAATACATATCATTTGGCCCTTCGACCTACTTCTGAGCTTCTTGATGAAGTTGGCGGTCTTCACAATTTTATGAATTGGCCACGGGCTCTGCTTACAGACTCTGGTGGCTTTCAAATGGTTTCACTGTTGCATCTAGCCGATATCACAGAAAAAGGCGTGACATTTCAGTCACCAGTAGATGGAAAGCCAATGCTTCTAACACCTGAGGAATCAATTCAAATACAAAATAGAATTGGAGCAGATATCATTATGGCTCTTGATGATGTTGTAAAGACCACCATTACTGGTCCAAGAGTTGAGGAAGCTATGTATCGAACACTTAGATGGATAGACAGATGCATAGCAGCTCATTCGAGACCTCGTGATCAGAACTTGTTTGGTATTGTGCAAGGTGGATTAGATCCTATATTGAGGGATATCTGTGTCAAAGGTATGGTGGAGCGCAATTTGCCTGGCTATGCTATTGGTGGTCTTTCAGGCGGTGAAGATAAAAATTCATTTTGGCGAGTTGTTGCTCAGTGCACTGCTGCTTTGCCAGAGGATAAACCACGATATGTTATGGGAGTTGGTTATCCACTTGATATTGTTGTTTGTAGTGCTTTGGGCGCTGACATGTATGACTGTGTTTACCCTACCCGTACAGCACGCTTTGGCACTGCTCTTGTTCCTGAGGGAGTATTAAAACTAAAACATAGAGGAATGGCTGATGACACCCGTCCCATTGATCCTAACTGCCCTTGTATGGTTTGCAAGAACTACACGAGGGCTTACATCCATTGCCTTGTGACAAAAGATGCTATGGGATCTCAGCTTGTGTCATATCATAATTTATATTACATGATGCAGCTTAGTAGGGATCTGCACTCTTCAATAATTGAAGGAAGGTTCCCAAAGTTTGTATGCAACTTTCTACGCAAAATGTTCCCGAAAGGTGATGTTCCTGAATGGGTCTGCAACGCTATGGAGGTGGCTGGAATCGACATTTCTTCCTGCTGTGCTCCATTTTCATCACACCAAGAACATGATTCCAAAAATGAGTCAGATGAACTAAATGAGGTAGAAATGGCACAGGCTGGTAGACATACATGA 1308 0.4304 MFLHGLAVFQLFLEVRTFLSQILGRFNRARAARLTLPHFVCQTPLFMPVGTQGTIKGLTTSQLEEIGCQIILGNTYHLALRPTSELLDEVGGLHNFMNWPRALLTDSGGFQMVSLLHLADITEKGVTFQSPVDGKPMLLTPEESIQIQNRIGADIIMALDDVVKTTITGPRVEEAMYRTLRWIDRCIAAHSRPRDQNLFGIVQGGLDPILRDICVKGMVERNLPGYAIGGLSGGEDKNSFWRVVAQCTAALPEDKPRYVMGVGYPLDIVVCSALGADMYDCVYPTRTARFGTALVPEGVLKLKHRGMADDTRPIDPNCPCMVCKNYTRAYIHCLVTKDAMGSQLVSYHNLYYMMQLSRDLHSSIIEGRFPKFVCNFLRKMFPKGDVPEWVCNAMEVAGIDISSCCAPFSSHQEHDSKNESDELNEVEMAQAGRHT. 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g01691 435 MobiDBLite consensus disorder prediction 412 435 - -
Seca4g01691 435 Gene3D - 16 382 IPR036511 GO:0006400|GO:0016763
Seca4g01691 435 NCBIfam tRNA-guanine transglycosylase 24 380 IPR002616 GO:0006400|GO:0016763
Seca4g01691 435 NCBIfam tRNA guanosine(34) transglycosylase Tgt 25 380 IPR004803 GO:0008479|GO:0101030
Seca4g01691 435 PANTHER QUEUINE TRNA-RIBOSYLTRANSFERASE CATALYTIC SUBUNIT 1 20 404 - -
Seca4g01691 435 Pfam Queuine tRNA-ribosyltransferase 28 380 IPR002616 GO:0006400|GO:0016763
Seca4g01691 435 Hamap Queuine tRNA-ribosyltransferase [tgt]. 18 379 IPR004803 GO:0008479|GO:0101030
Seca4g01691 435 SUPERFAMILY tRNA-guanine transglycosylase 22 379 IPR036511 GO:0006400|GO:0016763
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g01691 Seca-Chr4 27531786 27539580 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g01691 K00777 - gmx:100819664 786.563
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g01691 4 27531786 27539580 Seca4g01691 4 27531786 27539580 ECH